PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON46667.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HB-other

Protein Properties

Length: 1757aa MW: 197529 Da PI: 5.1146

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON46667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.3	2.7e-18	35	90	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++ + yps++ r+eL++klgL++rq ++WF+ rR k+kk PON46667.1 35 PKRQMKTPFQLETLEKAYALEAYPSESIRAELSEKLGLSDRQLQMWFCHRRLKDKK 90 69****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1757 aa Download sequence
MESVSDEENQ NKIDNTNTNN GNNKINSSNE GQSKPKRQMK TPFQLETLEK AYALEAYPSE 60 SIRAELSEKL GLSDRQLQMW FCHRRLKDKK EGGPAKKQRK MVPVLPESPI DELRAGAEPG 120 SDYGSGSGSG SSPFGPAADL RNVVSRSSMG DDMPPMGRRY NGQRQSMMEL RAIAIVEAQL 180 GEPLRDDGPV LGIEFDSLPP DAFGAPIVAD QKRSGHRFEG KSYDRHDAKS NKATPRALHE 240 YPFLPDPSIM RSDLYGQVAN NSAIDGSTVR SPSFAVGNEQ LPRSQGHVSR VRHSSGQDKQ 300 GVAFPSPSID DASLPLKDSI TNIRVNPPIS EHPIISPENP YLLPDGQIFP NDGILRMERK 360 RKNEEARIAK EVEAHEMRIR KELEKQENLR RKHEERLRKE MERQDRERRK EEERLMREKQ 420 REEERSKREQ RREMERREKF LQKESLRAEK KKQKEELRKE REAVRRKAAL EKATARRIAR 480 ESMELIEDEQ LELMEMAAAR KGLPSIISLD HGTLQSLESL RDFLVAFPPK SVRLKRPFAI 540 QPWTNSEKNI GNLLMVWRFL ITFADVLGLW PFTLDEFVQA FHDYDSRLLG EIHVALLKLI 600 IKDIEDVART PSTGLGMNQN GAANPGGGHP EIVEGAYTWG FDIRNWQRHL NPLTWPEIFR 660 QLALSAGFGP QLKKRSIAWS YLPDNDEGKS CQDVISTLRS GSAAENAFAI MQEKGLLLPR 720 RSRHRLTPGT VKFAAFHVLS LEGSKGLTVL ELADKIQKSG LRDLTTSKTP EASISVALTR 780 DAKLFERIAP STYRVRAAYR KDPADAEAIL SAARKKVQVF ENGFLAVEDA DEVERDEDSE 840 CDDVDEDPEV DDLVTPSSAN IVTEDYIDLN TCSGSGKENL CNNVALNLQN EFDKDSLSVT 900 LSSSKDAKCL SATPEQFVAS ENTRGSTSDE ENMEIDESKS GESWIHGLTE GEYSDLSVEE 960 RLDALVALIG VANEGNSIRV VLEDRLEAAN ALKKQMWAEA QFEKGRFKEE NIVKLDFPPL 1020 VGGKTEMHLA RSAAEGSQSP LPDIDNKTTD MSPNIAKNQK PVYDLNIVHN DLNSMPAEKT 1080 SVAQDFSTGP DNFLSQQLAF ASKRSRSQLK SYIAHRAEEM YVYRSLPLGQ DRRRNRYWQF 1140 VASTSSNDPG SGRIFVELQD GNWRLIDTEE AFDALLMSLD TRGIRESHLR LMLQKIETSF 1200 KENVRRSMKY SSITGRGVTV VKCETDGMKY SPDCPASFDS PGSIVSGVNS DPDMVETSSS 1260 FRIELGRSET EKKAALRRFQ DFQKWMWKEC FNSSALRAMK YGKKRAAQLL DTCDFCLSSY 1320 YFEDSHCVSC HHTFLATGSD LEFSQHTIHC KEKRKSDPGN IHVLDSSPPL GSRLLKALLA 1380 VIEISVPLEA LQSFWTLTHR MTWGAKLNAS LSSEQLLQIL TLFESVMKRD FLSSNFASTD 1440 ELLGSCNQSD NTLRDYSGPG SVPILPWIPL TSSAVALRLY EFDGSIAYLP EEKPEPTDDK 1500 EFGEYMKLPT RFTPQRNDKG IEVTELDYNE HMREENRSQK SVQNSYKRGR GGREQGRGKK 1560 LHKRANGSKP AAARRNSRVS DNVHQGLRQP GGKILKQGGG RGRRTVRKRR PGNKVVEDMV 1620 QVHMADTHSS PESEGESPRN FGEEWDDEKV DVDHMKDDDN IIGEEAVESD DNAQEEEYEQ 1680 GNWEVGYNGV SSEWNGGLME VSDDDADAFE DDDNGVEEVG EEDSEGDVDV SEGSDEMANR 1740 IENDEGSDLS ASEDYSD

Sequence ? help Back to Top

Protein Sequence Length: 1757 aa Download sequence

MESVSDEENQ NKIDNTNTNN GNNKINSSNE GQSKPKRQMK TPFQLETLEK AYALEAYPSE  60
SIRAELSEKL GLSDRQLQMW FCHRRLKDKK EGGPAKKQRK MVPVLPESPI DELRAGAEPG  120
SDYGSGSGSG SSPFGPAADL RNVVSRSSMG DDMPPMGRRY NGQRQSMMEL RAIAIVEAQL  180
GEPLRDDGPV LGIEFDSLPP DAFGAPIVAD QKRSGHRFEG KSYDRHDAKS NKATPRALHE  240
YPFLPDPSIM RSDLYGQVAN NSAIDGSTVR SPSFAVGNEQ LPRSQGHVSR VRHSSGQDKQ  300
GVAFPSPSID DASLPLKDSI TNIRVNPPIS EHPIISPENP YLLPDGQIFP NDGILRMERK  360
RKNEEARIAK EVEAHEMRIR KELEKQENLR RKHEERLRKE MERQDRERRK EEERLMREKQ  420
REEERSKREQ RREMERREKF LQKESLRAEK KKQKEELRKE REAVRRKAAL EKATARRIAR  480
ESMELIEDEQ LELMEMAAAR KGLPSIISLD HGTLQSLESL RDFLVAFPPK SVRLKRPFAI  540
QPWTNSEKNI GNLLMVWRFL ITFADVLGLW PFTLDEFVQA FHDYDSRLLG EIHVALLKLI  600
IKDIEDVART PSTGLGMNQN GAANPGGGHP EIVEGAYTWG FDIRNWQRHL NPLTWPEIFR  660
QLALSAGFGP QLKKRSIAWS YLPDNDEGKS CQDVISTLRS GSAAENAFAI MQEKGLLLPR  720
RSRHRLTPGT VKFAAFHVLS LEGSKGLTVL ELADKIQKSG LRDLTTSKTP EASISVALTR  780
DAKLFERIAP STYRVRAAYR KDPADAEAIL SAARKKVQVF ENGFLAVEDA DEVERDEDSE  840
CDDVDEDPEV DDLVTPSSAN IVTEDYIDLN TCSGSGKENL CNNVALNLQN EFDKDSLSVT  900
LSSSKDAKCL SATPEQFVAS ENTRGSTSDE ENMEIDESKS GESWIHGLTE GEYSDLSVEE  960
RLDALVALIG VANEGNSIRV VLEDRLEAAN ALKKQMWAEA QFEKGRFKEE NIVKLDFPPL  1020
VGGKTEMHLA RSAAEGSQSP LPDIDNKTTD MSPNIAKNQK PVYDLNIVHN DLNSMPAEKT  1080
SVAQDFSTGP DNFLSQQLAF ASKRSRSQLK SYIAHRAEEM YVYRSLPLGQ DRRRNRYWQF  1140
VASTSSNDPG SGRIFVELQD GNWRLIDTEE AFDALLMSLD TRGIRESHLR LMLQKIETSF  1200
KENVRRSMKY SSITGRGVTV VKCETDGMKY SPDCPASFDS PGSIVSGVNS DPDMVETSSS  1260
FRIELGRSET EKKAALRRFQ DFQKWMWKEC FNSSALRAMK YGKKRAAQLL DTCDFCLSSY  1320
YFEDSHCVSC HHTFLATGSD LEFSQHTIHC KEKRKSDPGN IHVLDSSPPL GSRLLKALLA  1380
VIEISVPLEA LQSFWTLTHR MTWGAKLNAS LSSEQLLQIL TLFESVMKRD FLSSNFASTD  1440
ELLGSCNQSD NTLRDYSGPG SVPILPWIPL TSSAVALRLY EFDGSIAYLP EEKPEPTDDK  1500
EFGEYMKLPT RFTPQRNDKG IEVTELDYNE HMREENRSQK SVQNSYKRGR GGREQGRGKK  1560
LHKRANGSKP AAARRNSRVS DNVHQGLRQP GGKILKQGGG RGRRTVRKRR PGNKVVEDMV  1620
QVHMADTHSS PESEGESPRN FGEEWDDEKV DVDHMKDDDN IIGEEAVESD DNAQEEEYEQ  1680
GNWEVGYNGV SSEWNGGLME VSDDDADAFE DDDNGVEEVG EEDSEGDVDV SEGSDEMANR  1740
IENDEGSDLS ASEDYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	84	91	RRLKDKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein