PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON45335.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 694aa MW: 75418.1 Da PI: 5.3346

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON45335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.4e-12	517	562	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L PON45335.1 517 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 562 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MTDYRIQPTM NLWTDDNASM MEAFMSSSDL SAFWATPPSQ QPPPSAAAAA HTHHHSQPQQ 60 SSASTSAAAP PHAAAQQPKG PPPVAAFNQE TLQQRLQALI EGARESWTYA IFWQSSYDYS 120 GATVLGWGDG YYKGEEDKGR GKSKSSASSV AEQEHRKKVL RELNSLISGS SPSTDDAVDE 180 EVTDTEWFFL VSMTQSFVNG GGLPGQALFN SSSVWVAGTD SLANSTCERA RQGQIFGLQT 240 IVCIPSENGV VELGSTELIF QSSDLMNKVR VLFNFSNLEV GSWPLSGGAP DQGENDPSSF 300 WLNDPSSTAM EVKDSVTTTA GASASVPSSN NPQTSKSTVQ FENPSSSSLT ENPSAIQSNN 360 QGQQAQTQSL FTRELNFSEY GFDGSSVKNN ENSHSLKPES GEILNFGESK RSSYNGNGNL 420 FSGQSQFAAE ENNNTNKKKR SPNSRGSNDE GMLSFTSGVL LPSSGVVKSI GGAGDSDHSD 480 LEASVVREVD SSRVVEPEKR PRKRGRKPAN GREEPLNHVE AERQRREKLN QRFYALRAVV 540 PNVSKMDKAS LLGDAISYIN ELKSKLSTAE SDKEDLQKQM DSMKRELAGK DSRSSSADQD 600 LSMSNHHGSK LIDLDIDVKI IGWDAMIRIQ CSKKNHPAAR LMAALMELDL EVHHASVSVV 660 NDLMIQQATV KMGSRFYTQE QLRLALTSKV GDAR

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MTDYRIQPTM NLWTDDNASM MEAFMSSSDL SAFWATPPSQ QPPPSAAAAA HTHHHSQPQQ  60
SSASTSAAAP PHAAAQQPKG PPPVAAFNQE TLQQRLQALI EGARESWTYA IFWQSSYDYS  120
GATVLGWGDG YYKGEEDKGR GKSKSSASSV AEQEHRKKVL RELNSLISGS SPSTDDAVDE  180
EVTDTEWFFL VSMTQSFVNG GGLPGQALFN SSSVWVAGTD SLANSTCERA RQGQIFGLQT  240
IVCIPSENGV VELGSTELIF QSSDLMNKVR VLFNFSNLEV GSWPLSGGAP DQGENDPSSF  300
WLNDPSSTAM EVKDSVTTTA GASASVPSSN NPQTSKSTVQ FENPSSSSLT ENPSAIQSNN  360
QGQQAQTQSL FTRELNFSEY GFDGSSVKNN ENSHSLKPES GEILNFGESK RSSYNGNGNL  420
FSGQSQFAAE ENNNTNKKKR SPNSRGSNDE GMLSFTSGVL LPSSGVVKSI GGAGDSDHSD  480
LEASVVREVD SSRVVEPEKR PRKRGRKPAN GREEPLNHVE AERQRREKLN QRFYALRAVV  540
PNVSKMDKAS LLGDAISYIN ELKSKLSTAE SDKEDLQKQM DSMKRELAGK DSRSSSADQD  600
LSMSNHHGSK LIDLDIDVKI IGWDAMIRIQ CSKKNHPAAR LMAALMELDL EVHHASVSVV  660
NDLMIQQATV KMGSRFYTQE QLRLALTSKV GDAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	499	507	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein