PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON45249.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 361aa MW: 40965.4 Da PI: 4.8373

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON45249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.3	7.6e-29	134	194	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK++ g+++prsYYrCt++ +C+++k+v+rs++dp ++eitY+g+H+++ PON45249.1 134 DDGYSWRKYGQKDILGAKYPRSYYRCTFRntqSCWATKQVQRSDDDPYLFEITYRGTHTCS 194 8************************998889************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MEGSWSWEQK TLISELIQGM DLAKQLKQNL CAKSSPETRD FLVQRILSSY EKALLILKWS 60 GSIGQPHQPL GVATGMCVPE SPISINESPR SDDFERGLKD HQDLRDSSKK RKTLPRWTDQ 120 VRVSSENGLE GPQDDGYSWR KYGQKDILGA KYPRSYYRCT FRNTQSCWAT KQVQRSDDDP 180 YLFEITYRGT HTCSQASNSV QPPTSPEKQD QKQNNHNIIP QQQQFEYSNP KFPSNLRVIT 240 EDLEHIEVVE SPFSFPSTSY GCMKSEDSFT PLVLDTETFT GGFSQSFISP ATPESNYYPL 300 SPFQMNNPAA FHNVQRSESE HTEIVSANTS ATNSPIPELD FPLDPVDIDP NFPFDTPGFF 360 S

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MEGSWSWEQK TLISELIQGM DLAKQLKQNL CAKSSPETRD FLVQRILSSY EKALLILKWS  60
GSIGQPHQPL GVATGMCVPE SPISINESPR SDDFERGLKD HQDLRDSSKK RKTLPRWTDQ  120
VRVSSENGLE GPQDDGYSWR KYGQKDILGA KYPRSYYRCT FRNTQSCWAT KQVQRSDDDP  180
YLFEITYRGT HTCSQASNSV QPPTSPEKQD QKQNNHNIIP QQQQFEYSNP KFPSNLRVIT  240
EDLEHIEVVE SPFSFPSTSY GCMKSEDSFT PLVLDTETFT GGFSQSFISP ATPESNYYPL  300
SPFQMNNPAA FHNVQRSESE HTEIVSANTS ATNSPIPELD FPLDPVDIDP NFPFDTPGFF  360
S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	112	LRDSSKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23810.1	2e-74	WRKY family protein