PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON45000.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 331aa    MW: 36648.1 Da    PI: 9.828
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON45000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY108.62.9e-34176233259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s+fprsYYrCtsa+C+vkk+vers +dp+vv++tYeg+H+h+
  PON45000.1 176 EDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFSDPSVVVTTYEGQHTHP 233
                 8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MDEKKREVIK MIKADNTSFS EAISSGFPFS SAFDSSEFGE KGSLGFMDLL GVTDYFPTPI  60
SMFDFPALAS SNIPTSTTTA TTKKEAMVST DALSNQPATP NTSSISSASS EALNEEQTKT  120
AARATKGQKQ TVSLTIFLRI QRPTLYIRLK AKKTNQKKQR EPRFAFMTKS EVDHLEDGYR  180
WRKYGQKAVK NSPFPRSYYR CTSASCNVKK RVERSFSDPS VVVTTYEGQH THPSPLISRP  240
AHAAPPPAAA AFPMPFQRSQ LLPHHHYHFA HDVLSSNNSN FGNYDTLSNI GSTTNSANFL  300
HERRFCTPSG SALITDHGLL QDIVTSNMLN P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.15e-62WRKY family protein