PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON43731.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TCP

Protein Properties

Length: 458aa MW: 50570.3 Da PI: 6.2952

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON43731.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	69.7	9.8e-22	52	105	5	58
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpa 58 ++ + ++hTkv+gR RRvRl+a+c +F L++eLG+ +d++t++WLl q p PON43731.1 52 RRLKGDRHTKVDGRHRRVRLPATCCPGIFRLTRELGHRSDGETVQWLLSQLRPD 105 56678********************************************98886 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MDAKQEELCQ EETMDANQQP KATAMAPASF EGDPLLEIQV QPQDQGLLLQ RRRLKGDRHT 60 KVDGRHRRVR LPATCCPGIF RLTRELGHRS DGETVQWLLS QLRPDLVLPH RPHSSRSRRS 120 KPTGPVNGEN GLNDMAVSRP VVRATVVQAS TVVYDTPATL DKAERLIASA AAYGSQLVVF 180 PEAFVGGYPH SVMFNAVKES HLTNDNEFQK YYASAINVPG PEVDRLANIA DKYSVHLVIG 240 VVERVELLLF STVLYFDTMG RYLGKCRKLL PVASETAVWC GEENSSLPVY ETTIGKIGGL 300 VCWDNRMPHL RTELYAKGVE IYCAPTAEAR EVWRASMTHI ALEGGCFVLS ANQFYRRNNY 360 PLPPEEYVSG DSNGDASLDT VLCSGGSLIV SPSGTILAGP NYQGESLISA DLDLSEIARA 420 KLEFSRAEHT ARPNYASWIT KSYNADSFPC PVKTEVID

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MDAKQEELCQ EETMDANQQP KATAMAPASF EGDPLLEIQV QPQDQGLLLQ RRRLKGDRHT  60
KVDGRHRRVR LPATCCPGIF RLTRELGHRS DGETVQWLLS QLRPDLVLPH RPHSSRSRRS  120
KPTGPVNGEN GLNDMAVSRP VVRATVVQAS TVVYDTPATL DKAERLIASA AAYGSQLVVF  180
PEAFVGGYPH SVMFNAVKES HLTNDNEFQK YYASAINVPG PEVDRLANIA DKYSVHLVIG  240
VVERVELLLF STVLYFDTMG RYLGKCRKLL PVASETAVWC GEENSSLPVY ETTIGKIGGL  300
VCWDNRMPHL RTELYAKGVE IYCAPTAEAR EVWRASMTHI ALEGGCFVLS ANQFYRRNNY  360
PLPPEEYVSG DSNGDASLDT VLCSGGSLIV SPSGTILAGP NYQGESLISA DLDLSEIARA  420
KLEFSRAEHT ARPNYASWIT KSYNADSFPC PVKTEVID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72010.1	1e-17	TCP family protein