PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON42942.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 326aa    MW: 36535.3 Da    PI: 6.3806
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON42942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.39e-163382255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+e E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L + +eY++ Lq
  PON42942.1 33 RSKHSETEQRRRSKINERFQILRDLIPQN----DQKRDKASFLLELIEYVQFLQ 82
                899*************************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MVESSRGHQE EFEDDEEVTH KVKVDGKSRE KNRSKHSETE QRRRSKINER FQILRDLIPQ  60
NDQKRDKASF LLELIEYVQF LQEKLNMYEG SYQGWSAEPT KLLPWRNQHA PTESFADHTQ  120
VVKNGSDLQN NVVSPSMPPN PQNSLESDMG SAMVYKTLDH FPGSATQSDP PNAQQITMLD  180
SIGRCGVPSL ALHESVSDEG DVDRLPQPLP ESWQGGHTTV SSVLNHAPSI KEDKSGRVRT  240
SNSYSQGVLD TLTQALQSSG VDLSQTRISV QINVANRTES GLTSMASSSK DHANRSLNSQ  300
VMSHTQVTSA DDKFERAHKR LRINEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G38860.15e-54bHLH family protein