PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON42685.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NAC

Protein Properties

Length: 382aa MW: 42933.6 Da PI: 6.6667

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON42685.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.2	5.6e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 + pGfrFhPtdeelv +yL kve+++l++ e ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ +++ PON42685.1 14 MLPGFRFHPTDEELVGFYLISKVEQRPLPI-ELIKQVDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSdGTK 111 579*************************.89***********8888999***********************************95666 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lvfy+gra kg ktdW+mhe+rl PON42685.1 112 YIGLKKSLVFYRGRAAKGMKTDWMMHEFRL 141 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MEEKNDMDKI DDVMLPGFRF HPTDEELVGF YLISKVEQRP LPIELIKQVD IYKYDPWDLP 60 KLATTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGT KYIGLKKSLV 120 FYRGRAAKGM KTDWMMHEFR LPSLPDSAPP KKLLDKSFPA HDSWAICRIF KKTNSMAQRA 180 LSHSWMSPVP VIAQAEILTQ GANCTQFSPE KIQLCCNGDF QQQQPPLSTA TFSAPDISPY 240 RPINPFSSGE IPNGFVFSPP EVSGQTKSTV DSGSMVMNHA MIGNLSNGSE SVEEFSGFSI 300 SLPRDNMQGN NMDTTEEDLA GLKKNQGAIV VNNQWGAIRS IGFPFSLPPN DNTWKPNLLW 360 DSDSPPCPSE MSTSYSTNKC YN

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MEEKNDMDKI DDVMLPGFRF HPTDEELVGF YLISKVEQRP LPIELIKQVD IYKYDPWDLP  60
KLATTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGT KYIGLKKSLV  120
FYRGRAAKGM KTDWMMHEFR LPSLPDSAPP KKLLDKSFPA HDSWAICRIF KKTNSMAQRA  180
LSHSWMSPVP VIAQAEILTQ GANCTQFSPE KIQLCCNGDF QQQQPPLSTA TFSAPDISPY  240
RPINPFSSGE IPNGFVFSPP EVSGQTKSTV DSGSMVMNHA MIGNLSNGSE SVEEFSGFSI  300
SLPRDNMQGN NMDTTEEDLA GLKKNQGAIV VNNQWGAIRS IGFPFSLPPN DNTWKPNLLW  360
DSDSPPCPSE MSTSYSTNKC YN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-101	NAC family protein