PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON42679.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 330aa MW: 36858 Da PI: 6.1671

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON42679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.8e-17	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++++ g+ R+ k+c++rw +yl PON42679.1 13 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYL 60 79****************************99**********97 PP
2	Myb_DNA-binding	49.6	9.3e-16	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E++ ++++ ++lG++ W++Ia++++ Rt++++k++w++yl PON42679.1 66 RGNFTDHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTYL 111 89******************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MGRPPCCDKG VKKGPWTPEE DIILVSYIQE HGPGNWRAVP TNTGLLRCSK SCRLRWTNYL 60 RPGIKRGNFT DHEEKMIIHL QALLGNRWAA IASYLPQRTD NDIKNYWNTY LKKKLSKLQA 120 GLEGNSHSRE EFSSSQPTMS RGQWERRLQT DIRMAKQALS EALSPEKSTS LTDQKPSSSG 180 FPSTTKQVPQ TSTYASSTEN ISRLLKSWMR NPPKRTKMAQ SEVSNLYTTG TDSASSEGTP 240 LSTTSANNNG IDLSEAFESL FGFESFESSN SDFSQSNMSP EASLFQDESN PDPSAQLPLS 300 LLEKWLFDEG AAQGKEVLSD MILDESADFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28910.1	1e-110	MYB family protein