PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON42600.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TALE

Protein Properties

Length: 743aa MW: 82360.8 Da PI: 6.8988

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON42600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.8	8.6e-09	474	511	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + PON42600.1 474 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 511 554459******************************88 PP
2	BELL	115	3.8e-37	333	404	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e++elqk+k+kLls+leeV++rYk+y++q+++v+ssFeavag g+a++Y +lA+ka+Srh rcLkd i++qi PON42600.1 333 EFMELQKRKTKLLSMLEEVERRYKHYCDQMKAVVSSFEAVAGAGAATVYSALASKAMSRHIRCLKDGIVNQI 404 679********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 743 aa Download sequence
MARELCEDKS RNMVSSAGFC YSDVSPSNNP SPAHIQTQFT NQIQDFHESN PEIFNLTTGM 60 EIIGFAKSTD ANTSDTTTAT TTNPSPSSSM WKAFTISKAG PSSSKTINES TTSHDHHDHD 120 DHHQHQFYDH FTTGISETSS ENLMVGPDQH HHHQQQSTGA WAQENRFLVD DSSLRCVFPC 180 EGNEKPSQGL SLTLNSANPS SIGLQSFELR QTNHHHQQDH HDHMRFISSN SRDGFFGKLA 240 NIQPQQMNIN INQDGFLGKS VNLHHQGQFQ LRNSKYLNPA QELLNEFCGL GTKHTDLMTK 300 QKSEKKSKLW DDQVNNGSSG ASSSKKQSLH SLEFMELQKR KTKLLSMLEE VERRYKHYCD 360 QMKAVVSSFE AVAGAGAATV YSALASKAMS RHIRCLKDGI VNQIQATRKA MGEKDAAGAA 420 PGTTRGETPR LRILDQTLRQ QRAFQQMTMM ESHPWRPQRG LPERSVSVLR AWLFEHFLHP 480 YPSDVDKHIL ARQTGLSRSQ VSNWFINARV RLWKPMVEEM YLEETKEREA NNNNNNSSSN 540 NMGGTSSDGV LTVDILGDPT RPPTGNQPEQ EQKPTADQLV RIDSECFSSI VINPDKSGGS 600 SKATLQNHQH IQRQQNFGRF GEVSFGSSMQ ELDFSSYNQA AGHSVLYANH DQNNGNHQAG 660 FSSGGGGGVS LTLGLQQHAG GGSHGGVSLA FSPASQSSLF YTRDHIDDQS QPAAAVQYSL 720 LDGEAQNLPY RNLMGAQLLH DLA

Sequence ? help Back to Top

Protein Sequence Length: 743 aa Download sequence

MARELCEDKS RNMVSSAGFC YSDVSPSNNP SPAHIQTQFT NQIQDFHESN PEIFNLTTGM  60
EIIGFAKSTD ANTSDTTTAT TTNPSPSSSM WKAFTISKAG PSSSKTINES TTSHDHHDHD  120
DHHQHQFYDH FTTGISETSS ENLMVGPDQH HHHQQQSTGA WAQENRFLVD DSSLRCVFPC  180
EGNEKPSQGL SLTLNSANPS SIGLQSFELR QTNHHHQQDH HDHMRFISSN SRDGFFGKLA  240
NIQPQQMNIN INQDGFLGKS VNLHHQGQFQ LRNSKYLNPA QELLNEFCGL GTKHTDLMTK  300
QKSEKKSKLW DDQVNNGSSG ASSSKKQSLH SLEFMELQKR KTKLLSMLEE VERRYKHYCD  360
QMKAVVSSFE AVAGAGAATV YSALASKAMS RHIRCLKDGI VNQIQATRKA MGEKDAAGAA  420
PGTTRGETPR LRILDQTLRQ QRAFQQMTMM ESHPWRPQRG LPERSVSVLR AWLFEHFLHP  480
YPSDVDKHIL ARQTGLSRSQ VSNWFINARV RLWKPMVEEM YLEETKEREA NNNNNNSSSN  540
NMGGTSSDGV LTVDILGDPT RPPTGNQPEQ EQKPTADQLV RIDSECFSSI VINPDKSGGS  600
SKATLQNHQH IQRQQNFGRF GEVSFGSSMQ ELDFSSYNQA AGHSVLYANH DQNNGNHQAG  660
FSSGGGGGVS LTLGLQQHAG GGSHGGVSLA FSPASQSSLF YTRDHIDDQS QPAAAVQYSL  720
LDGEAQNLPY RNLMGAQLLH DLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-135	TALE family protein