PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON42529.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Dof
Protein Properties Length: 307aa    MW: 33557.4 Da    PI: 7.5561
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON42529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof127.93e-402787262
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                +++alkcprCdst+tkfCyynnysl+qPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+ 
  PON42529.1 27 HDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA 87
                7899******************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MDSSSPSNDM LTCASRPLME RRLRPQHDQA LKCPRCDSTH TKFCYYNNYS LTQPRYFCKT  60
CRRYWTKGGT LRNIPVGGGC RKNKKVASKK PNDNNSAVVV VNNNNGSGSM NPAGPTDLQL  120
SFPEQVQFSH LSNLLGGSST SHGPGPNGLF EGPRPIDFME SKLEALVGNS SRNYDFMGSN  180
PTNEDLGMVG MGLGNLGTGT HHHHHHHHHG MVLEPNFHGL CPPFGMSLDG TSTGTFMDTC  240
QRIMLPYEGN EDQNGVDVKP NTKLLSLDWQ DQGCSDVGKD SFGYLNGLGS WSGVMNNYGP  300
STTNPLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62940.13e-47Dof family protein