PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON42503.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 541aa    MW: 60773.9 Da    PI: 4.4582
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON42503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS132.15.9e-411665383374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL ++ ea+++g+ el + +L  +s+ +sp g++++Rla+ + +   ++ ++           +++s     ++ aa+k+fs++ P++kf+h+taN+a
  PON42503.1 166 HLLKAIGEAMEKGQRELEEMILRCISQKVSPFGKSLERLAFNLCQQFDTQCVD---------YLKQES---LRNSEAAFKAFSQILPYVKFAHFTANSA 252
                 7899999************************************9999999998.........233333...556667999******************* PP

        GRAS 102 Ileavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg......skeeleetgerLakfAeelgvpfefnvl.vakrledlele 192
                 Ilea+    e+vHi+Df +++GlQW  ++ a a ++     l++T +  +e++       k + eet+++L + A+++g++++ + + +++ l++++  
  PON42503.1 253 ILEATPVGiEMVHIVDFHMGEGLQWSEMIVAAAMQK---KALKLTSIRWEEEKetdsdpLKWSFEETRRQLLDHARSFGLKLKVEEMgIEDLLSEVKKA 348
                 *****8766**********************99964...56******988777787766677899********************98555566666666 PP

        GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvksl...........sPkvvvvveqe.adh..nsesFlerflealeyysalfdsleaklpr 277
                 + r   +E  a n+ + + ++   s  ++    e+L++ k+l           +  ++v+++ + ++   n +sF + f   l +y al++s+e+++p 
  PON42503.1 349 KKRGGGREFWAFNCTVGVPHVR--SIRSRRLVMEFLEVAKDLlaansancrtsNRGIIVLADGDpCEKlkNCSSFSQFFDGHLVHYQALLESMESTFPD 445
                 666666**********999997..555555566777777766333322222224469999*999866558999************************98 PP

        GRAS 278 es.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkdrpLvsvSaWr 374
                     +r+++E  ++++ i+++   ++ e  e +e +    +  + +GF+  +ls++   +ak ++ + +  + r+e ++ +++ l W++ pLv vSaW+
  PON42503.1 446 RLtGARMTMECLFVSPYISSLAWSQKWE--EIKEGF----HLKTGFGFEGWSLSKESLVEAKVMVGEDSCYEVRIEgQNGNEAALEWRGVPLVRVSAWT 538
                 766*****************99998888..555555....345669*********************99777999955567788**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MMQPELFEPS WPFYDVIYST GNQSEYCSLS SMDSQVGGCE FSSMFTTIDR QSEISSNPFS  60
SPISGESVQF AASYDTLQVM SMMEDLPVDL EVFEPEIIGE FEALYGCPEE SVGSFPSQKF  120
SVEESDLGSP SSSTKSEASM DVTSVQPILT LPGVDMEIDN ELSVFHLLKA IGEAMEKGQR  180
ELEEMILRCI SQKVSPFGKS LERLAFNLCQ QFDTQCVDYL KQESLRNSEA AFKAFSQILP  240
YVKFAHFTAN SAILEATPVG IEMVHIVDFH MGEGLQWSEM IVAAAMQKKA LKLTSIRWEE  300
EKETDSDPLK WSFEETRRQL LDHARSFGLK LKVEEMGIED LLSEVKKAKK RGGGREFWAF  360
NCTVGVPHVR SIRSRRLVME FLEVAKDLLA ANSANCRTSN RGIIVLADGD PCEKLKNCSS  420
FSQFFDGHLV HYQALLESME STFPDRLTGA RMTMECLFVS PYISSLAWSQ KWEEIKEGFH  480
LKTGFGFEGW SLSKESLVEA KVMVGEDSCY EVRIEGQNGN EAALEWRGVP LVRVSAWTSQ  540
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60630.13e-16GRAS family protein