PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON42051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB_related | ||||||||
Protein Properties | Length: 249aa MW: 28401.3 Da PI: 7.4839 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26 | 2.1e-08 | 126 | 168 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT eE ++l d++kq+ + + Ia +++ Rt +++k+r+++ PON42051.1 126 TWTREETDQLFDLCKQFDLR-FIVIADRFPSSRTVEELKDRYYN 168 7*******************.*********************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MDAKDILGLP KNALPVTQEK KSRPQKDSQR KPDGISREVY ALTGGVPPLM PSIDSKKRPP 60 ADEKITWQWL PFTSSARKDN LQLYHWVRVV NGVPPTGDYS FAKYNKSVDI VQYTDEEYDK 120 HLADPTWTRE ETDQLFDLCK QFDLRFIVIA DRFPSSRTVE ELKDRYYNGM SSFPLLDSYL 180 SSILRVYLRT YALDQMIQAA RLLAAMPPSA RENSLASAVN LLEGKYEGAA DVLMTTFSNR 240 TSVFLAYII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47210.1 | 1e-102 | MYB_related family protein |