PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON42045.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 280aa MW: 31379.6 Da PI: 5.1772 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.5 | 7.4e-19 | 30 | 77 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd l ++v +G g+W+t ar+ g++Rt+k+c++rw++yl PON42045.1 30 KGPWTVEEDSMLFNYVSIHGEGRWNTLARHAGLKRTGKSCRLRWLNYL 77 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.7 | 1.8e-15 | 83 | 126 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ PON42045.1 83 RGNITLQEQLLILELHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 126 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MDISPVGDQL YGSVISTQQI SEEDQADLRK GPWTVEEDSM LFNYVSIHGE GRWNTLARHA 60 GLKRTGKSCR LRWLNYLRPS VRRGNITLQE QLLILELHSR WGNRWSKIAQ YLPGRTDNEI 120 KNYWRTRVQK QAKQLKCDVN SKQFQDAMRY VWIPRLIERI QAGRSDLSPA AQPATGSSDL 180 GGVGPWGSNL VDPNSRPDMS GTSSDTSEAQ LSSVSDLTDY ANPNPSGGSP AENGSGTSYQ 240 YGYGADIQGY GQNDNWLSGG DSLENWWSEE DLRFLETALQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 9e-78 | MYB family protein |