PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON41904.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 498aa MW: 54456.2 Da PI: 6.6132

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON41904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	78.2	9.4e-25	188	244	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+ + +rsYY+Ct+++C++kk +e++++ ++v+ei+Y+++H+h+ PON41904.1 188 SDGYNWRKYGQKQVKSPKGSRSYYKCTYSECCAKK-IECCDHSGHVTEIVYKSQHTHD 244 7******************************98.*******************7 PP
2	WRKY	94.5	7.8e-30	360	417	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e + ++ ++++itY+g H+h+ PON41904.1 360 ADGHRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVDNSNAIVITYKGVHDHD 417 6********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MAAEHESPEA LESQNLKTNE EEEEEEEEGE EEEDGNDEAG LGEFQRGEFR SSEPKSGAQP 60 KGLQLETLAA PDSGLQVNST SKSNDGAQTQ GQTGINHKEV LTDTRVQNPD APRENQHQST 120 ACQTSPELSP TSVTQSISSA PSPTFLEQRL SPPKDNGLCK PEADQQNSSD IISVSPVPSM 180 KNLKIPASDG YNWRKYGQKQ VKSPKGSRSY YKCTYSECCA KKIECCDHSG HVTEIVYKSQ 240 HTHDPPKKSK STKENKLPSV ERFSGSAVTK QPSKVPTDSD PSASVKESIH ETTPCSEKKR 300 QSLMNSDENG DVKVKEEHNN EPEPKKRLKK GQLEYSGSLL KPSKKPKFVV HAAGDVGISA 360 DGHRWRKYGQ KMVKGNPHPR NYYRCTSAGC PVRKHIESAV DNSNAIVITY KGVHDHDMPV 420 PKKRHGPPSA PLVAAAAPAS MNNSQSKKSE TTQNQIISTQ WSVDNEGELT GEALDLGGEK 480 AMESARTLLS IGFEIKPC

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MAAEHESPEA LESQNLKTNE EEEEEEEEGE EEEDGNDEAG LGEFQRGEFR SSEPKSGAQP  60
KGLQLETLAA PDSGLQVNST SKSNDGAQTQ GQTGINHKEV LTDTRVQNPD APRENQHQST  120
ACQTSPELSP TSVTQSISSA PSPTFLEQRL SPPKDNGLCK PEADQQNSSD IISVSPVPSM  180
KNLKIPASDG YNWRKYGQKQ VKSPKGSRSY YKCTYSECCA KKIECCDHSG HVTEIVYKSQ  240
HTHDPPKKSK STKENKLPSV ERFSGSAVTK QPSKVPTDSD PSASVKESIH ETTPCSEKKR  300
QSLMNSDENG DVKVKEEHNN EPEPKKRLKK GQLEYSGSLL KPSKKPKFVV HAAGDVGISA  360
DGHRWRKYGQ KMVKGNPHPR NYYRCTSAGC PVRKHIESAV DNSNAIVITY KGVHDHDMPV  420
PKKRHGPPSA PLVAAAAPAS MNNSQSKKSE TTQNQIISTQ WSVDNEGELT GEALDLGGEK  480
AMESARTLLS IGFEIKPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-113	WRKY family protein