PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON41831.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 524aa MW: 57003.1 Da PI: 7.4725

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON41831.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.1	7.1e-32	308	363	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ PON41831.1 308 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 363 68****************************************************97 PP
2	Myb_DNA-binding	40.1	8.2e-13	310	361	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ PON41831.1 310 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 361 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MASPSELSLD CKPAAHSYSM LLKSFGDQYH HLQQQQHHDQ TLKLEDFLNR LEEERLKIDA 60 FKRELPLCMQ LLTNAVETSR QQLQAYRANQ GPTRPVLEEF IPLKTSSSEG SADQKTTNPS 120 DNKANWMTSA QLWSQTTDGS TKPQPTNNTN IITQKEADHS ISFNVVSSPK LALDNKLSQR 180 INGPAAGGAF LPFSKDNRCT NNSSPSQSFR PLPELALAAA PAEKDIMGEE KKCSPEADAG 240 PLRRENSAGK VLGNGNSTGV VMEPGKGGNS SSINGSDHQA GQTAVTNNNT TTNSSSTTTT 300 TTNQTHRKAR RCWSPDLHRR FVNALQMLGG SQVATPKQIR ELMKVDGLTN DEVKSHLQKY 360 RLHTRRPSPS PQAPGAQAPQ LVVLGSIWVP PEYAAAAAHS GGPAALYSPH AASHAPPPHY 420 CAPPVPQDFY ASQAPPPAMP HHQLHHHHHH PLHHHLQIYK ATSQTHSSPE SDLRGAGDRS 480 ESIEDGKSES SSWKGESGDG ERRGLAALRE DGEESNGSEI TLKF

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MASPSELSLD CKPAAHSYSM LLKSFGDQYH HLQQQQHHDQ TLKLEDFLNR LEEERLKIDA  60
FKRELPLCMQ LLTNAVETSR QQLQAYRANQ GPTRPVLEEF IPLKTSSSEG SADQKTTNPS  120
DNKANWMTSA QLWSQTTDGS TKPQPTNNTN IITQKEADHS ISFNVVSSPK LALDNKLSQR  180
INGPAAGGAF LPFSKDNRCT NNSSPSQSFR PLPELALAAA PAEKDIMGEE KKCSPEADAG  240
PLRRENSAGK VLGNGNSTGV VMEPGKGGNS SSINGSDHQA GQTAVTNNNT TTNSSSTTTT  300
TTNQTHRKAR RCWSPDLHRR FVNALQMLGG SQVATPKQIR ELMKVDGLTN DEVKSHLQKY  360
RLHTRRPSPS PQAPGAQAPQ LVVLGSIWVP PEYAAAAAHS GGPAALYSPH AASHAPPPHY  420
CAPPVPQDFY ASQAPPPAMP HHQLHHHHHH PLHHHLQIYK ATSQTHSSPE SDLRGAGDRS  480
ESIEDGKSES SSWKGESGDG ERRGLAALRE DGEESNGSEI TLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	2e-46	G2-like family protein