PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON41789.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 387aa MW: 41911.1 Da PI: 8.3683 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.1 | 0.00014 | 58 | 80 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + Cp C+ksF++ L H r H PON41789.1 58 FACPLCDKSFNSGKALGGHKRIH 80 78***************999998 PP | |||||||
2 | zf-C2H2 | 15.3 | 5.7e-05 | 121 | 141 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 Cp C k F++k +L H+r+H PON41789.1 121 CPMCLKIFPSKISLFGHMRSH 141 ********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 387 aa Download sequence |
MEEVGRFADI STPSTVKTSG AASDIERLCL KLKIPEPQHY KEKEENKEEE QEEVVLPFAC 60 PLCDKSFNSG KALGGHKRIH NQQPTTTTFT SNIYSSNGSI GNFNDKATKD QTGSRSGANN 120 CPMCLKIFPS KISLFGHMRS HPERSWRGIE PPATGSPPLL LLPKPTCTST SSTDHDHDHQ 180 VLDHDDHDRI VIDLAAAPPL VNWGVTAKRG RKSLTRSATS ISPAAASPIT TASASHDDSD 240 SSARSASEDR MKKAALDLMA LARASPAATN YNNRPAPPKD HKNIIFKKRK FAEYSDCHSS 300 QNNGIQVRMQ KPKLVTKASS ASGPCKHVCS VCERSFPCYQ ALGGHMSIHK KAAPATAPAP 360 APAPAPRLVN IDLNQPPPPH DDDVDDH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 287 | 313 | KKRKFAEYSDCHSSQNNGIQVRMQKPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26940.1 | 9e-13 | C2H2 family protein |