PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON41515.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 223aa    MW: 24773.4 Da    PI: 7.1303
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON41515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97.1e-2090141155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +g+++AeIrdp++ng  +r++lg++ tae+Aa a+++a+ +++g
  PON41515.1  90 TRFRGVRRRP-WGKYAAEIRDPKKNG--ARVWLGTYETAEDAALAYDRAAFQIRG 141
                 589*******.***********9998..***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MSRSRTRSLI MTDSDYALLD SIRHHLLEDD FNFNPTATLF APSLDINSIS ITPTPPPPSG  60
RDAGTPVRQL NEAEETEHHV PTAASDEVGT RFRGVRRRPW GKYAAEIRDP KKNGARVWLG  120
TYETAEDAAL AYDRAAFQIR GSKAKLNFPH LIGSDHSQLS RVTPKRRSPE PEPSSTSDDC  180
SGSGKRTRRS TGACGKTTQV KSELDESDWL SFCQVETLNN DSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.15e-31ERF family protein