PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON41432.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 375aa MW: 42444.9 Da PI: 8.1874

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON41432.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.7	4.2e-13	168	219	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ ++ Lr+++P++ + ++ + a+i A++++k+L+ PON41432.1 168 QRMTHIVVERNRRKQMNDYLAVLRSMMPSS---YVQRGDQASIIGGAINFVKKLE 219 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MLILTLNLER QRERDLERER EREMALETEF FQQDPFGCNI NGWNKDFHGL VGGGGPWSYG 60 YAFPENDMNM HSKVLANDNK LVGKGFNNLA MDLESIASPS SMVQGRTDQD ATNFSLAENF 120 IGNYNLNANE GPFANRVFSP PETPAVTTAR RKRRRIKSIK NKEEVENQRM THIVVERNRR 180 KQMNDYLAVL RSMMPSSYVQ RGDQASIIGG AINFVKKLEQ LLQLLEAKKR TKQQSSSSDS 240 KYSSSPFSDF FIFPQYSTYS SKYGGSCDDN KKTSTVIETK STAEQPSAVA DVEVTMVDSH 300 ANIKVLLKRH QNQLLKMVVG LQFLRLVVLH LNVTTVDSMV LYSFSVKVED DSQLTSVNEI 360 ATSVYEMVGR IQNES

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MLILTLNLER QRERDLERER EREMALETEF FQQDPFGCNI NGWNKDFHGL VGGGGPWSYG  60
YAFPENDMNM HSKVLANDNK LVGKGFNNLA MDLESIASPS SMVQGRTDQD ATNFSLAENF  120
IGNYNLNANE GPFANRVFSP PETPAVTTAR RKRRRIKSIK NKEEVENQRM THIVVERNRR  180
KQMNDYLAVL RSMMPSSYVQ RGDQASIIGG AINFVKKLEQ LLQLLEAKKR TKQQSSSSDS  240
KYSSSPFSDF FIFPQYSTYS SKYGGSCDDN KKTSTVIETK STAEQPSAVA DVEVTMVDSH  300
ANIKVLLKRH QNQLLKMVVG LQFLRLVVLH LNVTTVDSMV LYSFSVKVED DSQLTSVNEI  360
ATSVYEMVGR IQNES

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	151	155	RKRRR
2	152	156	KRRRI
3	169	180	RMTHIVVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-55	bHLH family protein