PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON41353.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | LBD | ||||||||
Protein Properties | Length: 157aa MW: 17849.2 Da PI: 7.7534 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 128 | 4.3e-40 | 5 | 104 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C+++C+++pyfp+++p++fa+vh++FGasnv k+l++lp+++r +a++s+ +eA++r++ PvyG+vg+i++l+q++++++++la++++ PON41353.1 5 RCAACKYLRRSCPSNCIFSPYFPSNDPQRFACVHRIFGASNVGKMLQRLPPDRRAEAADSMHFEAKCRIEFPVYGCVGIISQLHQEIQNVETQLATTRA 103 6**********************************************************************************************9998 PP DUF260 100 e 100 e PON41353.1 104 E 104 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MISGRCAACK YLRRSCPSNC IFSPYFPSND PQRFACVHRI FGASNVGKML QRLPPDRRAE 60 AADSMHFEAK CRIEFPVYGC VGIISQLHQE IQNVETQLAT TRAEIAFITS SNNTIQEAQL 120 RDDQYYSSLN NNFMQPQHTN IIGQSDQMAF NNSSWML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26660.1 | 7e-52 | LBD family protein |