PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON40678.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | Trihelix | ||||||||
Protein Properties | Length: 734aa MW: 80825.5 Da PI: 5.391 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 92.5 | 4.4e-29 | 74 | 158 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r++ lk+plWe+vs+k++ g++rs k+Ckek+en++k+yk++keg+ +r ++ +t+++f++lea PON40678.1 74 RWPRQETLALLKVRSDMDAAFRDATLKGPLWEDVSRKLAVLGYHRSGKKCKEKFENVHKYYKRTKEGRAGR--QDGKTYKFFTELEA 158 8********************************************************************98..56667******985 PP | |||||||
2 | trihelix | 105.1 | 5e-33 | 461 | 546 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k evl+Li++r+ +e++++++ k+plWee+s+ m++ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf++l+a PON40678.1 461 RWPKAEVLELIKLRSGLETKYQEAGPKGPLWEEISAEMQRMGYKRSAKRCKEKWENINKYFKKVKESNKKR-PEDAKTCPYFNELDA 546 8*********************************************************************8.99999*******985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 734 aa Download sequence |
MQRGQEEGGM SSTDDMSTSG GGGELTEQAG QQLPVEEASP ISSRPPAASV NLDHEFMSLS 60 SAGAGGSGGG GGNRWPRQET LALLKVRSDM DAAFRDATLK GPLWEDVSRK LAVLGYHRSG 120 KKCKEKFENV HKYYKRTKEG RAGRQDGKTY KFFTELEALH GTAANQPQPH QLPPPPPHPH 180 VSAVSIGISN PMPISSLRAS PNVHSATTSH LPPPYSTTAT PAPAPAPAPA PPSFSSNSSS 240 SSPGSEEDDD DNDLEGGEPS NAAGSSRKRK RDWSSSSTMM EFFENLMKQV MHKQEAMQQR 300 FLEVIEKREQ DRMIKEEAWK RQEMARLTRE HQLMAQERAI SASRDAAIVS FLQKITGQTI 360 QLPDPPPPPP PLNKNNNYIH NVVNVHAAPP PHPAVSPPAP APSVAAAPVI AQQHDNQLVV 420 QSADWYHPPV STGQQQQQQL AAEQQEHTHT FTGGASSSSS RWPKAEVLEL IKLRSGLETK 480 YQEAGPKGPL WEEISAEMQR MGYKRSAKRC KEKWENINKY FKKVKESNKK RPEDAKTCPY 540 FNELDALYRK KILGSGASYN QMNRAEQQQQ EHNISATVEP PRESRSDMRP ITALTAEQVK 600 PPAANIGAEN KIDGAETSNF GEAAKEPEDI VMELMEVDDQ DRCGGTQAGL VVPQQQQTLL 660 VNDYDRIEEL ADSHDDDEED EDEEEDTDDE DQLQVERKMA NYKLQLQRQT SSTGPSKNGA 720 GNETTPSSFL AMVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 4e-47 | Trihelix family protein |