PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON40659.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 334aa MW: 37413.7 Da PI: 6.3805 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.6 | 0.0018 | 4 | 26 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++sF + L H++ H PON40659.1 4 HRCKLCHRSFANGRALGGHMKAH 26 79******************998 PP | |||||||
2 | zf-C2H2 | 12.9 | 0.00033 | 266 | 288 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+F + L H r+H PON40659.1 266 FQCPYCYKVFGSGQALGGHKRSH 288 89***************999997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MERHRCKLCH RSFANGRALG GHMKAHLATL PLPPKTSTAI DPPSSSSYSS PQEEEEEQEQ 60 EVEVEVEEAE AEVEEEDKAL AYGLRENPKK SFRLADPEFS FAVDAGSVIQ DRESETESSR 120 NPTRRRSKRN RRPFVAAETK NAKLRRSSWV DSLAEPEPVS SVSDTSPEED VAMCLMMLSR 180 DVWMRVDSEE QDHHKTIIRA VNGPQQQEQE QEIVKLKRVG AKQKHRCEKC NKVFRSHQAM 240 CGHKKICFRN EIEAKNAGFG ADDKIFQCPY CYKVFGSGQA LGGHKRSHGH QLNSATSTGA 300 ISSSNFSGKQ KEGLIDLNLP APLEEDDFSV LSDA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 132 | RNPTRRRSKRNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45120.1 | 2e-43 | C2H2 family protein |