PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON40390.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 283aa    MW: 30903.9 Da    PI: 9.6951
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON40390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.52.1e-19204238135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg+ kTp+WR gp g+ktLCnaCG++y++ +l
  PON40390.1 204 CQHCGAEKTPQWRAGPYGPKTLCNACGVRYKSGRL 238
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MESLDPAACL MDDLLNFSLD IGEEDEEDDK PSRALASSLK PSGLLGPVDT IRPLHELVEE  60
ELEWISNKDA FPAVESFILS DHPGSGVVVS KLHSPVSVLE GGSAISSSSN NSHSSNSSNA  120
TSLTSRFGGL KAPCRTRGKR RCRRRRANYA DITGRKLCWS QANNNNNNSC SKINGNGAKA  180
EKVKPNTKKT TTTTRMTTTI GRKCQHCGAE KTPQWRAGPY GPKTLCNACG VRYKSGRLVP  240
EYRPASSPSF SSEVHSNSHR KILEMRRVKQ MMGMVMKHPL ESG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.19e-41GATA family protein