PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON39901.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family WRKY
Protein Properties Length: 342aa    MW: 38889.1 Da    PI: 4.9467
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON39901.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.83.1e-30148206259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D+++WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers +dp+++++tY++eH h 
  PON39901.1 148 SDKWAWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSPSDPEIFIVTYTSEHSHA 206
                 79*************************998****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MENWDLLAVV RGGVSNNTNN IGASRNMVAA ANIMVDPQTT SFFVNNPLST QENDDDDHLA  60
LFHSFPHLFE TTTALDELEE LYKPFYPVDM VPPSPHLISS SPITVQINQE PQKKLIMIKK  120
EPAAPKYKKR KSQQKRVVKE VREDGLYSDK WAWRKYGQKP IKGSPYPRSY YRCSSSKGCS  180
ARKQVERSPS DPEIFIVTYT SEHSHAHPTR RNSLAGSTRS KFPVGTISEA QLEISNPDDH  240
SQNAENDLVE KMSRDNNIEH EGILSNVMLG HNNELIFPSL EDLEKGLEEL DDDQSTSATA  300
FKPEFDYSIG FDLDYDFSDH QYNFMDAWFN NDQYSTTMTG TC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.12e-28WRKY family protein