PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON39855.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 460aa    MW: 49690 Da    PI: 5.2835
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON39855.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS373.72.4e-114984573374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                  lLl+cAe+v+ ++l  a  +L ++ el+sp g++ +R+ ayf+ AL+ar+ +s+ ++y+ l+ ++ + ++s + ++al+ ++ +sP++kfsh+taNqa
  PON39855.1  98 GLLLQCAECVAMDNLDDAGDILPEIAELSSPFGTSPERVGAYFAHALQARVISSCLGTYSPLTNRTLTLTQSHRIFNALQSYNSISPLVKFSHFTANQA 196
                 58************************************************************************************************* PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
                 I +a++g +rvH+iD+di+qGlQWp L++ LasR+++  s+RiTg+gs    s+e le+tg+rLa+fA++lg+pfef++l  k  +  ++++L v+p E
  PON39855.1 197 IFQALDGVDRVHVIDLDIMQGLQWPGLFHILASRSRKIRSVRITGFGS----SAELLESTGRRLADFASSLGLPFEFHPLEGKIGSITDPSQLGVRPSE 291
                 ************************************************....9**************************988899999*********** PP

        GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvva 299
                 a++V++++  h l+d ++s       +L+l+  l+Pk+++v+eq+++h ++sFl rf+eal+yysalfd+l    +++s er++vE++l+g ei+n+va
  PON39855.1 292 ATVVHWMH--HCLYDVTGSDLG----TLRLLALLRPKLITVIEQDLSH-GGSFLGRFVEALHYYSALFDALGDVSGADSLERHTVEQQLFGCEIRNIVA 383
                 *******9..888888888888....**********************.789*******************7777************************ PP

        GRAS 300 cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                   g +r+ + + + +W e l+++GF+pv+l+ + a+qa+lll +++++gy++ ee+g+l lgWkd +L+++SaW+
  PON39855.1 384 VGGPKRTGEVK-VDRWGEELKRVGFQPVSLGGNPAAQASLLLGMYPWKGYTLVEENGCLKLGWKDLSLLTASAWQ 457
                 *****998887.9*************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    
MLQSLVTQSP IATTSSNSNP NPNPNPDPSS SSSSMKTKRV DRELAAGDDS AAADPSSKRP  60
NSGRNFSGEA TVSGDKAVEE QDDELVVEGE STGLRLLGLL LQCAECVAMD NLDDAGDILP  120
EIAELSSPFG TSPERVGAYF AHALQARVIS SCLGTYSPLT NRTLTLTQSH RIFNALQSYN  180
SISPLVKFSH FTANQAIFQA LDGVDRVHVI DLDIMQGLQW PGLFHILASR SRKIRSVRIT  240
GFGSSAELLE STGRRLADFA SSLGLPFEFH PLEGKIGSIT DPSQLGVRPS EATVVHWMHH  300
CLYDVTGSDL GTLRLLALLR PKLITVIEQD LSHGGSFLGR FVEALHYYSA LFDALGDVSG  360
ADSLERHTVE QQLFGCEIRN IVAVGGPKRT GEVKVDRWGE ELKRVGFQPV SLGGNPAAQA  420
SLLLGMYPWK GYTLVEENGC LKLGWKDLSL LTASAWQPSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-179GRAS family protein