PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON39709.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 262aa MW: 29434.6 Da PI: 5.9756 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.5 | 3.5e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd++l + + G +W+ ++++ g++R++k+c++rw +yl PON39709.1 14 RGAWTLEEDQKLTNFILNNGIQCWRHVPKRAGLKRCGKSCRLRWINYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.2 | 6.9e-17 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+ ++eE++++++++ +lG++ W++Ia +++ gRt++++k++w+ PON39709.1 67 RGAISEEEEDQIIQLHSRLGNR-WSKIALHFP-GRTDNEIKNHWN 109 7889******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MGRQPCCEKI GLKRGAWTLE EDQKLTNFIL NNGIQCWRHV PKRAGLKRCG KSCRLRWINY 60 LRPDVKRGAI SEEEEDQIIQ LHSRLGNRWS KIALHFPGRT DNEIKNHWNC KIKKKLRLNG 120 LAHGPKNNHD EGTDLNSTNS SEQQASKCSP KEVQNSTTTP NSGSKQSYIL QNENGNDMSC 180 GSSLNDNIIR SGSDAASIIL QADDSSGNSS GSTTFSAGMV LEEEYRCNFS EEDFGNWMES 240 VEAFLSWDEC NNLEDVFNVG DD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 111 | 117 | KIKKKLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 2e-69 | MYB family protein |