PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON39351.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 388aa    MW: 42282.7 Da    PI: 6.896
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON39351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA551.1e-17270304135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  PON39351.1 270 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 304
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MEAPELHNYI NNHQNNNNVV KTAMAAGGDH FAVEDLLDFS NEDVDAIATV DGAFDSSALT  60
AGNSTDSNST HSTTHVLDTS CNSSSFSGCE PNGFLPDHFG SRDFPDAHFS SDLCVPYDDL  120
AELEWLSNFV EESFSSEDLQ KLHLISGIKA RGPDESSDTT TRTQPNRAAA SAAAPIFNPD  180
VSVPAKARSK RSRAPPCNWT SRLLHLSPTT SSSPPPPPPQ QYEHDVVVSV PHAPASTSTA  240
KKAVKAAAPK KKEAPDNGGP GPGAGEGRRC LHCATDKTPQ WRTGPMGPKT LCNACGVRYK  300
SGRLVPEYRP AASPTFVLTK HSNSHRKVLE LRRQKEMLRS GVHQHQQQPQ FLPHHHHHHH  360
HQSLMFDASS GEDYLIHQQV GPDYRQII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.15e-89GATA family protein