PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON39297.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 223aa MW: 24544.5 Da PI: 7.7725 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.3 | 1.2e-20 | 36 | 85 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrd ++ ++r++lg+f++aeeAa+a++aa+++++g PON39297.1 36 KFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEEAARAYDAAALSFRG 85 79*******.**********883....5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MRRGGGKAID PPAAATSRLR EVEKRIESKS PLQEIKFRGV RKRPWGRFAA EIRDPWKKTR 60 VWLGTFDSAE EAARAYDAAA LSFRGPKAKT NFPSSPRDPI YHHHHERVSS KIDVIQASRP 120 TSSSLSSTVE SFSGPKVSAR PVVAQRPRCR PAVQPAQPDD DDCHSDCDSS SSVVDDCDDC 180 VLTSSFRRIL PFDLNLPPPP MDGPDLCDGG YADDDIQATA LCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 7e-25 | ERF family protein |