PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON39168.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C3H
Protein Properties Length: 493aa    MW: 53952.9 Da    PI: 8.0013
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON39168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.63.9e-07438462226
                 -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                  t++C +f  +  C+ G++C+F H+
  PON39168.1 438 NTKPCAYFKTSKGCWNGANCPFQHD 462
                 589*********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    
MPKHKKRSRT LKRVSWAPGL DLCQVKLFSS EDCPAKVGMN SQDDLQAKST WTLPSNTKGS  60
NDLPPGFERG FAVGQSSMEL PCIPRIQWKC PPKIVPTPAW QVVSGEESEE VKNQKSREMR  120
VLEAVYPRVS SIPTSPSVSL VVENEYYDDN QTPLVSLTPI EEEESPDTPF DKATPVNTTL  180
SSQQPSLPQV LLPSGTHVSK LDSHSMNPLA STQPSSAKLP DLGADVVAAT YTALAAFMTC  240
SKSGNLIDTD LLVKILNDPK LIANMMNNGP PQAANTGSAP ISESKTVSSS VPLTFPTLDT  300
EGPADENSFP IPKGVSSTLN TGSHQQDAHP NSRFQQVMRT PVSTPTPESY FSIPNQVTSA  360
ANVASVQTST VTLSTFTVRE PARPIKDLNY YKNLIKQHGG EKVEKKDSIN AQNRENYHYF  420
QDSKPVQNYE LGEMKSKNTK PCAYFKTSKG CWNGANCPFQ HDVPKQWRAG KVIEGHSAKR  480
MKLNGEIYGS MLV