PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON38997.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HB-other

Protein Properties

Length: 376aa MW: 41521.6 Da PI: 6.7107

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON38997.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19.8	1.4e-06	13	74	6	55
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55 +ft+++++e+e+ ++ n+ p +e LA++ ++ +qV +WFqNrR+ PON38997.1 13 RFTPTEVTEMETILQEhnNSMPARELLVGLADRFseskerqgkiTVQMKQVWNWFQNRRYAI 74 68999999999999965588999999999999999999999988999************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MGRPPSNGGP AFRFTPTEVT EMETILQEHN NSMPARELLV GLADRFSESK ERQGKITVQM 60 KQVWNWFQNR RYAIRAKLSR NPGKLSVSSM PRDDPMPVRN VPQPCTAPIP ASSVAGSGRS 120 ASENSIMEFE AKSGRDGAWY DVANFFSHRY LDTGDPEVLV RFAGFGPEED EWVNVRKHVR 180 QRSLPCESSE CVAVLPGDLI LCFQEGKEQA LYFDAHVLDA QRRRHDVRGC RCRFLVRYDH 240 DQSEEIVPLR KVCRRPETDY RLQQLHAVNE AASVEQQKSN LDSVAVNAPR SIIPAETIQR 300 QHNTDAASAA PVSLANAPLA TQTSILESKK AETCNVVGAG NSNTVPPDGN PITSGSLISN 360 SSVLLGDNMP EVGNIG

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MGRPPSNGGP AFRFTPTEVT EMETILQEHN NSMPARELLV GLADRFSESK ERQGKITVQM  60
KQVWNWFQNR RYAIRAKLSR NPGKLSVSSM PRDDPMPVRN VPQPCTAPIP ASSVAGSGRS  120
ASENSIMEFE AKSGRDGAWY DVANFFSHRY LDTGDPEVLV RFAGFGPEED EWVNVRKHVR  180
QRSLPCESSE CVAVLPGDLI LCFQEGKEQA LYFDAHVLDA QRRRHDVRGC RCRFLVRYDH  240
DQSEEIVPLR KVCRRPETDY RLQQLHAVNE AASVEQQKSN LDSVAVNAPR SIIPAETIQR  300
QHNTDAASAA PVSLANAPLA TQTSILESKK AETCNVVGAG NSNTVPPDGN PITSGSLISN  360
SSVLLGDNMP EVGNIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-131	HB-other family protein