PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON38901.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 377aa    MW: 42680.4 Da    PI: 5.1202
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON38901.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.58.5e-12209252654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  PON38901.1 209 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 252
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MHCIPSTWRN FILLSFLYEL SFSKERREKQ RTEKMELTQH AFLEELLAQR RDNWSSFSTG  60
LNDQFLPSGW SFDSYEENPV LAISSPPFLG FSSPAEANSE CPFIDQAYPF VDHGAVLMPE  120
LHSSYTKISH HEDYPSMVED EDQFGFLGCE NQSSTLEESK TSSCKVELIE QSSAEIVVPA  180
FNMGLCSSTS GEKKSTRPKK LEGQPSKNLM AERRRRKRLN DRLSMLRSIV PKISKMDRTS  240
ILGDTIDYMK ELLERISKLQ EEGIEDGTTK MINLLGISKE LKPSEVLVRN SPKFDVERRE  300
MDTRIDICCA AKPGLLLSTV NTLEALGLEI QQCVISCFND FSMQASCSDG AQQRTLINSE  360
DIKQAIFRNA GYGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1212219ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-91bHLH family protein