PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON38798.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 219aa    MW: 24400.4 Da    PI: 10.1129
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON38798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.2e-114691454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h+e ErrRR  iN  +++Lr++lP++      K++Ka++L ++++ +++L
  PON38798.1 46 KHSESERRRRMGINGQYATLRTILPNL-----IKMDKASVLAETIRRVREL 91
                79************************9.....6************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MHFFRGLQGC RNSNASSKQN SLNQGVISIC KPKLKADQAK LLAAHKHSES ERRRRMGING  60
QYATLRTILP NLIKMDKASV LAETIRRVRE LKKAVEEVEE VCCTVPDVDD ELRLEVGEDH  120
EESAGLVLIK ATLSCEDRPG LMLELINALK SVKRGVELRV VKAEMMTAGG RTKTVLWLRR  180
RGAGSGGRGY EHDDDNEAIL VMLRRTLKVV LAKRANGKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.12e-26bHLH family protein