PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON38228.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

GRF

Protein Properties

Length: 315aa MW: 35196.9 Da PI: 8.4986

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON38228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.5	1.2e-23	219	262	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rCrRtDGKkWRCsr+v++++k+CErH h++r rsrk++e PON38228.1 219 DQEPWRCRRTDGKKWRCSRNVIPDQKYCERHSHKSRPRSRKHVE 262 68****************************************97 PP
2	QLQ	50.2	8e-18	161	195	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT aQ q+L++Q ++yKy++a++PvPp+Ll++ + PON38228.1 161 PFTVAQRQELERQTMIYKYMMASAPVPPQLLLPFT 195 8******************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MGTRIGFVAS EKGAAKECDV GLGLRMQTNS NDNKSFSRNK MMMMTRMMPR HHDNENDDDG 60 DDAPHRGFGE EGCGLSGCGS GGGGGTSTIS DRENDNGPSL FCNTSNHHNN INSQVASMSD 120 IYDVVGSDSG SLLPKTLLLH NSEPFSYNSS GVMVNANVRV PFTVAQRQEL ERQTMIYKYM 180 MASAPVPPQL LLPFTKTPSN FAHLSSNRSL ELGISNTSDQ EPWRCRRTDG KKWRCSRNVI 240 PDQKYCERHS HKSRPRSRKH VELHSHFLNN PNHNNDNTRI PYSKPDFLDQ RRNHQSPFST 300 NLVSSTSATS HDQPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	1e-31	GRF family protein