PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON37907.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 391aa MW: 43584.6 Da PI: 9.6415

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON37907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G+++W++I ++mg + R +k+c +rw +yl PON37907.1 4 RQRWQPEEDALLRAYVKQYGPKDWSLICQRMGkpLQRDPKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36	1.6e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l + + +++G++ Wk+Ia++++ gRt+k + +w + PON37907.1 59 KGSLTPEEQSLVISLQTKYGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MKERQRWQPE EDALLRAYVK QYGPKDWSLI CQRMGKPLQR DPKSCLERWK NYLKPGLKKG 60 SLTPEEQSLV ISLQTKYGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQLKQ LHKSNKHSHH 120 PQSQALHASA TSSIVSHQSH PYPDGNIPVT GDGSPVKAAH GPYDHILETF AEKYVQPKLY 180 GGGGAFVPAL AVADPDPVLS LGSVNSAAPA AVIPPWMNPS SAAVMTTSSF SSCTSSTPSP 240 SVSLSLSPSE PVLDPELGRF VPVQQLGGLV QCCKELEEGR MSWLQHKKEA TWRLSRLEQQ 300 LESEKARKRR EKMEETEAKI RSLREEEMAS LSRIEGEYRD QLSALQREAE SKEAKLAEAW 360 CSRHVRLAKL AEQIGVHGAS SHGFTTSTIP N

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MKERQRWQPE EDALLRAYVK QYGPKDWSLI CQRMGKPLQR DPKSCLERWK NYLKPGLKKG  60
SLTPEEQSLV ISLQTKYGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQLKQ LHKSNKHSHH  120
PQSQALHASA TSSIVSHQSH PYPDGNIPVT GDGSPVKAAH GPYDHILETF AEKYVQPKLY  180
GGGGAFVPAL AVADPDPVLS LGSVNSAAPA AVIPPWMNPS SAAVMTTSSF SSCTSSTPSP  240
SVSLSLSPSE PVLDPELGRF VPVQQLGGLV QCCKELEEGR MSWLQHKKEA TWRLSRLEQQ  300
LESEKARKRR EKMEETEAKI RSLREEEMAS LSRIEGEYRD QLSALQREAE SKEAKLAEAW  360
CSRHVRLAKL AEQIGVHGAS SHGFTTSTIP N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	307	312	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	4e-88	MYB family protein