PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON37854.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Protein Properties

Length: 518aa MW: 57236.8 Da PI: 5.8664

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON37854.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58	1.8e-18	220	310	2	90
EEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 +k+l++sdv+++gr+vlpk+ aee +e+++++++d s+r+W+++++y ++ks++yvl+ ++ +Fvk+ngL+ gD+++++ +++++ PON37854.1 220 KKELKNSDVGSLGRIVLPKREAEEKlptlFD--KEGIQVVMRDiYSNREWSLRYKYwsNNKSRMYVLE-NTGDFVKQNGLEIGDSITLY--EDECK 310 6899*********************7633..36789*7788***99888888889999.*****************9..44555 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MDNFPVPHFL TSNTSTTSTS TNTNYSSVVQ STQPKLMAAT SATHDGSHNS IYEPCMSFWP 60 SSTTAALTTT NATTPDQYCY PAPRYFPHHD RGLQFPGGVY PGGAGRHRWG FGYRPLVVAG 120 QSSVGAVLVG VSEEQERRLL DAWTTKVARS KRRLARQRSL NLITRNCFPS SSSIATHGAA 180 NSSSATTLCD SRELPISGAG TRDLYTFCTP DKKRLRVLLK KELKNSDVGS LGRIVLPKRE 240 AEEKLPTLFD KEGIQVVMRD IYSNREWSLR YKYWSNNKSR MYVLENTGDF VKQNGLEIGD 300 SITLYEDECK NLGARPAPEP SCKRHLITNQ NTTVLDDKYV NSSNSTTNDE AYDNTNNIIS 360 KTAHYDGSSS LYASYSYELA RDEEDASLAL LIEQLNHEEQ QEANSLVTTL SSHIEYGTTN 420 ASSYSYGHSN ESSTTSSNHY GVVSGGGMSS TQSTTTIEAV ERTPPSSSSS SSVSRVEVHE 480 GEDHLEDFFG GLGTLPEVDD QYVYYNYATL FDRIMSDN

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MDNFPVPHFL TSNTSTTSTS TNTNYSSVVQ STQPKLMAAT SATHDGSHNS IYEPCMSFWP  60
SSTTAALTTT NATTPDQYCY PAPRYFPHHD RGLQFPGGVY PGGAGRHRWG FGYRPLVVAG  120
QSSVGAVLVG VSEEQERRLL DAWTTKVARS KRRLARQRSL NLITRNCFPS SSSIATHGAA  180
NSSSATTLCD SRELPISGAG TRDLYTFCTP DKKRLRVLLK KELKNSDVGS LGRIVLPKRE  240
AEEKLPTLFD KEGIQVVMRD IYSNREWSLR YKYWSNNKSR MYVLENTGDF VKQNGLEIGD  300
SITLYEDECK NLGARPAPEP SCKRHLITNQ NTTVLDDKYV NSSNSTTNDE AYDNTNNIIS  360
KTAHYDGSSS LYASYSYELA RDEEDASLAL LIEQLNHEEQ QEANSLVTTL SSHIEYGTTN  420
ASSYSYGHSN ESSTTSSNHY GVVSGGGMSS TQSTTTIEAV ERTPPSSSSS SSVSRVEVHE  480
GEDHLEDFFG GLGTLPEVDD QYVYYNYATL FDRIMSDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	2e-41	B3 family protein