PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON37569.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NF-X1

Protein Properties

Length: 1163aa MW: 129628 Da PI: 8.1317

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON37569.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	17.7	8e-06	186	204	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG H+C lCH+GpCp+Cp+ PON37569.1 186 CG-HRCLLLCHPGPCPSCPK 204 .*************96 PP
2	zf-NF-X1	17.8	7.1e-06	241	256	4	19
zf-NF-X1 4 HkCqklCHeGpCppCp 19 H+C+++CH GpCppC+ PON37569.1 241 HQCSEICHDGPCPPCR 256 ***************6 PP
3	zf-NF-X1	16.7	1.5e-05	399	418	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+H C + C+ G+CppC++ PON37569.1 399 CGRHACRRRCCDGDCPPCSE 418 ******************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 1163 aa Download sequence
MPSHDDHLHP PLSDSDADSD NGQPGFESSR HADLSDSIFR SYFEFTGRSQ TTPADLSKIQ 60 SFLTSSSSGA LSCLICLERI RTSDPTWSCT SICFAVFHLF CIQSWARQAS DLAALRASTR 120 LPIAQNRAAE VSVWNCPKCR FEYTQSQIPK VYLCFCGKLE NPPSDDPWVL PHSCGEVCDR 180 PLKHGCGHRC LLLCHPGPCP SCPKLVKSQC FCGSIEDVRR CGFKDFSCNN VCSKSLDCRA 240 HQCSEICHDG PCPPCRVRGM YRCQCGKKEE ERECCDRTNF RCENPCERML GCRRHVCSKG 300 CHSGECGPCP LQGKRTCPCG KRVYEGMSCD VAVPLCGATC DKMLSCGLHR CPERCHRGPC 360 IETCRIVVTK LCRCGSLMKE VPCYQDIACE RKCQRLRDCG RHACRRRCCD GDCPPCSEIC 420 GRKLQCKNHK CPSPCHRGPC APCPVMVTIS CACGETYFEV PCGTEMDQKA PRCPKRCPIK 480 PLCRHGTNIK PHKCHYGACP SCRMLCEEEY PCGHTCKLRC HGPMPPPNPE FSLKPRKKKN 540 VHQSECSPGS SCPPCAELIW RSCVGQHIGA ERMMLCSNRM QFACENLCGN LLPCGNHFCT 600 NTCHSLKTQL CEECNLSCQK VSNFPASERM PVCPHPCPLP CHPEDCPPCK VLVKRSCHCG 660 SMVHVFECMY YNTLSEKEQM TVRSCGGPCH RKLPNCTHLC PETCHPGQCP SPEKCSKKVT 720 VRCRCQTLKK EWLCYDVQAA YRDTGSDVKD ISKNQYGLGL LPCNSDCKKK VQAVDSELQL 780 RKSKAVEKAL GHINIYNLSH SENEKASQSA NVIVTAGHGD LKFWDLRDPF RPLWDFHPAP 840 KIINSLDWLP DPRCVILSFD DGTMRTLSLT KAAYDVHVTG KQFVGTKQQG LHTYSCLSFA 900 LWSIQVSRAT GMVAYCSADG NVLRFQLTTK AVDKDGSRNH TPHFLCGSLT EDESTVTINT 960 PVINAPPVPL KKSLNKCGDT RMALRDILSR STWAKREDDK MEEHPASNDQ ALALCYGDDS 1020 GVESELEETL ASLKRKKPSK SKSHTKKLPE DNLALAMVSV DDEPISSKRK ESLASLTRKK 1080 SPKSGSNTKK LPEDNLALVS ERKEIEKDSE FEVFPSKAIA MHRVRWNMNK GSERWLCYGG 1140 AAGVVRCQEI VLSDIEKKLA KKR

Sequence ? help Back to Top

Protein Sequence Length: 1163 aa Download sequence

MPSHDDHLHP PLSDSDADSD NGQPGFESSR HADLSDSIFR SYFEFTGRSQ TTPADLSKIQ  60
SFLTSSSSGA LSCLICLERI RTSDPTWSCT SICFAVFHLF CIQSWARQAS DLAALRASTR  120
LPIAQNRAAE VSVWNCPKCR FEYTQSQIPK VYLCFCGKLE NPPSDDPWVL PHSCGEVCDR  180
PLKHGCGHRC LLLCHPGPCP SCPKLVKSQC FCGSIEDVRR CGFKDFSCNN VCSKSLDCRA  240
HQCSEICHDG PCPPCRVRGM YRCQCGKKEE ERECCDRTNF RCENPCERML GCRRHVCSKG  300
CHSGECGPCP LQGKRTCPCG KRVYEGMSCD VAVPLCGATC DKMLSCGLHR CPERCHRGPC  360
IETCRIVVTK LCRCGSLMKE VPCYQDIACE RKCQRLRDCG RHACRRRCCD GDCPPCSEIC  420
GRKLQCKNHK CPSPCHRGPC APCPVMVTIS CACGETYFEV PCGTEMDQKA PRCPKRCPIK  480
PLCRHGTNIK PHKCHYGACP SCRMLCEEEY PCGHTCKLRC HGPMPPPNPE FSLKPRKKKN  540
VHQSECSPGS SCPPCAELIW RSCVGQHIGA ERMMLCSNRM QFACENLCGN LLPCGNHFCT  600
NTCHSLKTQL CEECNLSCQK VSNFPASERM PVCPHPCPLP CHPEDCPPCK VLVKRSCHCG  660
SMVHVFECMY YNTLSEKEQM TVRSCGGPCH RKLPNCTHLC PETCHPGQCP SPEKCSKKVT  720
VRCRCQTLKK EWLCYDVQAA YRDTGSDVKD ISKNQYGLGL LPCNSDCKKK VQAVDSELQL  780
RKSKAVEKAL GHINIYNLSH SENEKASQSA NVIVTAGHGD LKFWDLRDPF RPLWDFHPAP  840
KIINSLDWLP DPRCVILSFD DGTMRTLSLT KAAYDVHVTG KQFVGTKQQG LHTYSCLSFA  900
LWSIQVSRAT GMVAYCSADG NVLRFQLTTK AVDKDGSRNH TPHFLCGSLT EDESTVTINT  960
PVINAPPVPL KKSLNKCGDT RMALRDILSR STWAKREDDK MEEHPASNDQ ALALCYGDDS  1020
GVESELEETL ASLKRKKPSK SKSHTKKLPE DNLALAMVSV DDEPISSKRK ESLASLTRKK  1080
SPKSGSNTKK LPEDNLALVS ERKEIEKDSE FEVFPSKAIA MHRVRWNMNK GSERWLCYGG  1140
AAGVVRCQEI VLSDIEKKLA KKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05660.1	0.0	NF-X1 family protein