PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON36315.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 430aa MW: 46670.1 Da PI: 6.2464 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.8 | 2.1e-17 | 56 | 101 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v ++G ++W++Iar ++ gR++k+c++rw + PON36315.1 56 KGPWSPEEDAVLSRLVSKFGARNWSLIARGIP-GRSGKSCRLRWCNQ 101 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 55.3 | 1.5e-17 | 108 | 152 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T++Ed ++v a++ +G++ W++Iar ++ gRt++ +k++w++ PON36315.1 108 RKPFTEDEDRIIVTAHAAHGNK-WAAIARLLP-GRTDNAIKNHWNST 152 789*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 430 aa Download sequence |
MTVPNDAVSN DDDRTDELEL GAGGGSGGEA ELMELGEGSG GGGGGGGGGG RGARVKGPWS 60 PEEDAVLSRL VSKFGARNWS LIARGIPGRS GKSCRLRWCN QLDPCVKRKP FTEDEDRIIV 120 TAHAAHGNKW AAIARLLPGR TDNAIKNHWN STLKRKYPGF GGFETAPGDM MIDGSLDKKR 180 ASSEETLSLE TMNPLKNLEG RDTSVDNRPI QYENRVQVNE GCIAETDYHK LASEAEHHPT 240 VTRPVARISA FRAYNPLSRP THSSEFPQTV PTCGPLFQFS KSELGVSELF EDAHSEPMVP 300 FQCGHGCCAN SSQRQSYSSL LGPEFLEYEE GPSFSSHELI SITTDLNNIA WIKSVLENRR 360 PRIPDHAAIQ EVSRGSSSTS QAGLLKQNKV NGHMRFEEGR SKLMGMMTDV LSSQVPGRSF 420 AMPAEVEGLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G55730.1 | 2e-93 | MYB family protein |