PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON36297.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 298aa MW: 33654.8 Da PI: 6.9647

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON36297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.6	4.9e-07	24	68	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT+eE +++ a + + +W ++a++++ g++ +++ + PON36297.1 24 EWTKEENKKFESALAIFDETtpnRWVKVAEMIP-GKSVFDVIKQYK 68 7***************99*********.*999887775 PP
2	Myb_DNA-binding	40.2	8.1e-13	122	166	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ +++ + ++G+g+W+ I+r + ++t+ q+ s+ qky PON36297.1 122 PWTKDEHTRFLLGLMKYGKGDWRHISRDFVVTKTPTQVASHAQKY 166 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
METLHPSSSL SSSSWLFQGS QSSEWTKEEN KKFESALAIF DETTPNRWVK VAEMIPGKSV 60 FDVIKQYKEL EEDVSDIEAG RFPIPGYLAS PFSFELVDDR DCFRKRPLSA RGSDHERKKG 120 VPWTKDEHTR FLLGLMKYGK GDWRHISRDF VVTKTPTQVA SHAQKYYLRQ HSGGKDKRRP 180 SIHDFTTFNL TETTTSENNI GPLLDESSVI PPLQMSTEVA QKVLRDWNIP SDEEEALMVL 240 GSACGNLFMS SSPYDQIAPS GLKLHLGQNL FGGARYAAQT KPQASIFEVQ PSRYQARG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11280.1	2e-82	MYB family protein