PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON36150.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 544aa MW: 60357 Da PI: 7.9871

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON36150.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.6e-13	347	392	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ K++Ka+ L Av YIk+L PON36150.1 347 NHVEAERQRREKLNHRFYALRSVVPNV-----SKMDKASLLADAVVYIKEL 392 899*********************6.....5**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MEELMSPSCS SSTLVPFSQD ITPTIQERLL FIFQNRPEWW VYAIFWQAYN KDLNNNNSGV 60 VLSWCDGHFR GHKNAAAASK TGGLDFEIMS KKTTARVFSE EEEMDVDRLV NGGGGSGADV 120 NDIWWFYTVS LTRSFGAGIL GRAFSSGEYV WLRGGQDLEF NECDRVKEAR MHGVQTLVCV 180 ATPNGVLELG SSDLIKEDWS LIQMAKSLFA RVSTNYNSNN TVPRPQGNNH DHPHHPHHQN 240 HNQSPISVRD IPFLDIGIPT HYSGARNDQS SALLLPKRTD HKANLIGLSG TAGTVTGSSS 300 DSGRSDSDTG RTASGGGQFI VKKRRRKAAA TTTTTTMIES PAPPAVNHVE AERQRREKLN 360 HRFYALRSVV PNVSKMDKAS LLADAVVYIK ELKAKVEELE GKLVIEAQSN KYHQMRPKNG 420 NTMVSTITSN TTNKIDYYSS QFSPSVEQKR QISSYGSMVS AAGAMEVDVK MLGTVAMIRV 480 QCPDVNYPSA RLMNAVRDLE FQIIHVSISS VKELLFQDVL VRTDTDRFPT EEAMRSAIVR 540 IMQS

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MEELMSPSCS SSTLVPFSQD ITPTIQERLL FIFQNRPEWW VYAIFWQAYN KDLNNNNSGV  60
VLSWCDGHFR GHKNAAAASK TGGLDFEIMS KKTTARVFSE EEEMDVDRLV NGGGGSGADV  120
NDIWWFYTVS LTRSFGAGIL GRAFSSGEYV WLRGGQDLEF NECDRVKEAR MHGVQTLVCV  180
ATPNGVLELG SSDLIKEDWS LIQMAKSLFA RVSTNYNSNN TVPRPQGNNH DHPHHPHHQN  240
HNQSPISVRD IPFLDIGIPT HYSGARNDQS SALLLPKRTD HKANLIGLSG TAGTVTGSSS  300
DSGRSDSDTG RTASGGGQFI VKKRRRKAAA TTTTTTMIES PAPPAVNHVE AERQRREKLN  360
HRFYALRSVV PNVSKMDKAS LLADAVVYIK ELKAKVEELE GKLVIEAQSN KYHQMRPKNG  420
NTMVSTITSN TTNKIDYYSS QFSPSVEQKR QISSYGSMVS AAGAMEVDVK MLGTVAMIRV  480
QCPDVNYPSA RLMNAVRDLE FQIIHVSISS VKELLFQDVL VRTDTDRFPT EEAMRSAIVR  540
IMQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	322	327	KKRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-36	bHLH family protein