PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON35919.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 486aa MW: 55066.5 Da PI: 7.2139

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON35919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.2	1.2e-12	306	349	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er+RR ri +++ +Lr+l+Pk +Kl+K ++L A++YIk+Lq PON35919.1 306 HTERNRRFRIQNGILTLRSLVPKI-----TKLDKTSTLVDAINYIKELQ 349 57*******************7.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MRLREVEWFR PLIGAQQWDY IVVWKLGDEP SRFIEWMGCC CRGSIDCGNV KEEKSEENHL 60 NPLCRDDYMK HLVRTKACKE LAQLPTYMPL YSGVHHIEVL LSSQPRWLSQ VDSSDSKPSH 120 DDSGGTRALV PVEGGLIELY CTKHIAKEPK VLELVLAHCN ISLEKETMAR NICSNERPNK 180 GLHLDSLTEQ WPFSSHLLSL SSSLQARCAG AQSSSHTSIE GSSRTGSSNP PNEHMLFDSS 240 CVYESQSELF EQSIEKCSSS HKLGCNGNFL AQLAQQEGSV RGHEAEKSAT KTIRKNGEEC 300 HSKNLHTERN RRFRIQNGIL TLRSLVPKIT KLDKTSTLVD AINYIKELQK EEKELQDELK 360 KMEEEDYCHK NKNEYTITKP NKSKEAAKRL LSAGQNQSST FGTKQQIVVH VEVNQIGKRE 420 FFIKLLRRQS QDGFVRLMEA LDSLELQVIS ANLTTFNGIV QNILEVKAEK DIQPEKLRSA 480 LIELTG

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MRLREVEWFR PLIGAQQWDY IVVWKLGDEP SRFIEWMGCC CRGSIDCGNV KEEKSEENHL  60
NPLCRDDYMK HLVRTKACKE LAQLPTYMPL YSGVHHIEVL LSSQPRWLSQ VDSSDSKPSH  120
DDSGGTRALV PVEGGLIELY CTKHIAKEPK VLELVLAHCN ISLEKETMAR NICSNERPNK  180
GLHLDSLTEQ WPFSSHLLSL SSSLQARCAG AQSSSHTSIE GSSRTGSSNP PNEHMLFDSS  240
CVYESQSELF EQSIEKCSSS HKLGCNGNFL AQLAQQEGSV RGHEAEKSAT KTIRKNGEEC  300
HSKNLHTERN RRFRIQNGIL TLRSLVPKIT KLDKTSTLVD AINYIKELQK EEKELQDELK  360
KMEEEDYCHK NKNEYTITKP NKSKEAAKRL LSAGQNQSST FGTKQQIVVH VEVNQIGKRE  420
FFIKLLRRQS QDGFVRLMEA LDSLELQVIS ANLTTFNGIV QNILEVKAEK DIQPEKLRSA  480
LIELTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10610.1	4e-38	bHLH family protein