PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON35761.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 350aa MW: 39757.1 Da PI: 6.5097

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON35761.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l +++k +G g W++ +++ g++R++k+c++rw++yl PON35761.1 14 RGAWTAMEDKILTEYIKIHGEGKWRSLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	50.6	4.5e-16	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E+el+++++++lG++ W++Ia +++ gRt++++k++w++ PON35761.1 67 RGNITRDEEELIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110 7899****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MGRSPCCSKE GLNRGAWTAM EDKILTEYIK IHGEGKWRSL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI TRDEEELIIR LHNLLGNRWS LIAGRLPGRT DNEIKNYWNT NIGKKIQAHS 120 LKSIHTTSRK PSSNRPKFQE LGPKPKTTHS GAQVQQPSYK IHNILTSSSR VVRSKATRCT 180 KVVLLHQEPQ NKVVLLDHGK EIDGGGSTTT DDNDHQYYNT SEPPVDEVPS AVDYDHDQLV 240 NINCDHHQTF DDVPDKSTYS SSQFMNVDFE NNDHDDFLSQ FLNIDFSFND DLAENIVSSS 300 NSQGFSFSKS DKENETYLFS HDMLFGLDLE SATASLNGQA ADDDIDWLQE

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MGRSPCCSKE GLNRGAWTAM EDKILTEYIK IHGEGKWRSL PKRAGLKRCG KSCRLRWLNY  60
LRPDIKRGNI TRDEEELIIR LHNLLGNRWS LIAGRLPGRT DNEIKNYWNT NIGKKIQAHS  120
LKSIHTTSRK PSSNRPKFQE LGPKPKTTHS GAQVQQPSYK IHNILTSSSR VVRSKATRCT  180
KVVLLHQEPQ NKVVLLDHGK EIDGGGSTTT DDNDHQYYNT SEPPVDEVPS AVDYDHDQLV  240
NINCDHHQTF DDVPDKSTYS SSQFMNVDFE NNDHDDFLSQ FLNIDFSFND DLAENIVSSS  300
NSQGFSFSKS DKENETYLFS HDMLFGLDLE SATASLNGQA ADDDIDWLQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09460.1	1e-63	MYB family protein