PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON35537.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 468aa MW: 51305.2 Da PI: 6.9149

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON35537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	52.9	6.8e-17	275	321	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq PON35537.1 275 VHNLSERRRRDRINEKMKALQELIPHS-----NKTDKASMLDEAIEYLKSLQ 321 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MIHDETVSWI QYPLEDSFEK DFCSNFFSEL PSCDPIEVEK PIKHIEEEKS SKFGDSDTTH 60 ILSTSQHHKL KPSNGVPRPE NHMPPPRLHY SSSAQQNQSL GSLGKVVNFS QFSAPGKCDL 120 RSSSGQQLAG NESGTRGEVR ECSVMTVGLS HCGSNQLPAD LDVSRFSSNN GDGNNGLSAG 180 AFKEDVRKIV LQGESGKTET LEPTVTSSSG GSGSSFGRTC KQSTATTSGN NDNKRKIRDA 240 EELECQSEAA EHESAAANKS SQRSGSSRKS RAAEVHNLSE RRRRDRINEK MKALQELIPH 300 SNKTDKASML DEAIEYLKSL QLQLQVMWMG SGMAPMMFPG VQHYMSRMGM AMGPPALPSI 360 HNPMHFPRVP VVDQSMIVAP ITDQSVLYQT PAFNPINYQN QMQNTSFQEQ YARCMGFHPM 420 QTMSQPVNMF RFSPQTAQQS QSIAQQGIST GPSNYGVPTD GGLSGKMG

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MIHDETVSWI QYPLEDSFEK DFCSNFFSEL PSCDPIEVEK PIKHIEEEKS SKFGDSDTTH  60
ILSTSQHHKL KPSNGVPRPE NHMPPPRLHY SSSAQQNQSL GSLGKVVNFS QFSAPGKCDL  120
RSSSGQQLAG NESGTRGEVR ECSVMTVGLS HCGSNQLPAD LDVSRFSSNN GDGNNGLSAG  180
AFKEDVRKIV LQGESGKTET LEPTVTSSSG GSGSSFGRTC KQSTATTSGN NDNKRKIRDA  240
EELECQSEAA EHESAAANKS SQRSGSSRKS RAAEVHNLSE RRRRDRINEK MKALQELIPH  300
SNKTDKASML DEAIEYLKSL QLQLQVMWMG SGMAPMMFPG VQHYMSRMGM AMGPPALPSI  360
HNPMHFPRVP VVDQSMIVAP ITDQSVLYQT PAFNPINYQN QMQNTSFQEQ YARCMGFHPM  420
QTMSQPVNMF RFSPQTAQQS QSIAQQGIST GPSNYGVPTD GGLSGKMG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	285	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59060.4	9e-36	bHLH family protein