PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON35154.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 544aa    MW: 61241.8 Da    PI: 6.7073
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON35154.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4194e-1281735441374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l+++L+ecA+avs++d ++a  +++ l +++s +g+p+qRl ay++e+L+arl +s+s++ykal++se    +sse l++++++++++P+ +f+++ aN
  PON35154.1 173 LKQVLVECARAVSESDITRAVDFMEVLGNMVSVSGEPIQRLGAYLLEGLRARLEKSGSSIYKALKCSEPI--TSSELLSYMSILYQICPFWRFAYISAN 269
                 5799***************************************************************998..699************************ PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                   I ea++ e+r+HiiDf+i qG QW+aL++ La Rp+gpp +RiTgv++++s   +   l+ +g+rL k Ae l+vpfef+  +a   ++++le+Lr+
  PON35154.1 270 VVIREAIQYEQRIHIIDFQIAQGSQWMALFEDLARRPGGPPFVRITGVDDSQSAfaRGGGLHLVGKRLLKQAELLKVPFEFHG-AAMCGSEVKLEALRI 367
                 **************************************************99989999*************************.899************ PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +pgEa++Vn+ + lh++ desvs+e++rd++L+l+kslsPkv+++veqe+++n+++F++rf e+l+yy+a+f+s+++  pr++++ri+ E+++++r+iv
  PON35154.1 368 RPGEAIVVNCPYVLHHMADESVSTENHRDRLLRLIKSLSPKVMTLVEQESNTNTSPFFARFRETLDYYTAMFESIDVARPRDDKQRISAEQHCVARDIV 466
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 n++aceg +r+erhe + kWr+rl++aG++p+pls+++++ ++ llr+++++ +r+ e +g+l+lgWk+r + + SaWr
  PON35154.1 467 NMIACEGPDRVERHELFTKWRARLMMAGLTPYPLSSSVTCAVNDLLREYNQN-FRIGEMNGALYLGWKNRLMATSSAWR 544
                 **************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    
MQTSQKHQRT GVIHGLYHQP MQEIDSYRMP HFQILENNMF QDIGSQGKTV SFEKCNGQFF  60
TLDSSPATTD FLTCDSPSAV SVLSNRSTFS PQGSHTCSSD PHHSSDIYSG SPISGCSVAD  120
DGSDLKHKLR EIEISLLGIE SEIVDSCYCC YKTEARQNTS MATWKMLEGR LDLKQVLVEC  180
ARAVSESDIT RAVDFMEVLG NMVSVSGEPI QRLGAYLLEG LRARLEKSGS SIYKALKCSE  240
PITSSELLSY MSILYQICPF WRFAYISANV VIREAIQYEQ RIHIIDFQIA QGSQWMALFE  300
DLARRPGGPP FVRITGVDDS QSAFARGGGL HLVGKRLLKQ AELLKVPFEF HGAAMCGSEV  360
KLEALRIRPG EAIVVNCPYV LHHMADESVS TENHRDRLLR LIKSLSPKVM TLVEQESNTN  420
TSPFFARFRE TLDYYTAMFE SIDVARPRDD KQRISAEQHC VARDIVNMIA CEGPDRVERH  480
ELFTKWRARL MMAGLTPYPL SSSVTCAVND LLREYNQNFR IGEMNGALYL GWKNRLMATS  540
SAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein