PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON34936.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Nin-like

Protein Properties

Length: 951aa MW: 104132 Da PI: 5.8878

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON34936.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.2	4e-29	573	624	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ PON34936.1 573 AEKNVSLNVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 624 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 951 aa Download sequence
MEHPFSSKEK ENEYWSSSRA QVENLASFDG VPRGMLPEDV FNSFSELLTF DAYAGWSNSP 60 AVTDQVSATY GLSSLPSTTY VPMDGSNFAE QNVGALPVTE VGGNFNLPRS SFNYGDKIVF 120 QPVNSEMGMV DSTICRPTRY SLDERMLRAL SFVKESSGGG ILAQVWVPVK HGDQLFLSTS 180 EQPYLLDHML AGYREVSRMY TFAAEGKPGC FPGLPGRVFI SKIPEWTSDV GYYKKNEYVR 240 VEHAYNHQVR GSLALPVFES DPGMPCCAVL EIVTTKEKPN FDTEMEIVCH ALQAVNLRTN 300 PPPRLVHQCL SKNQKDALAE IIDILRAVCH AHRLPLALTW IPCCYGEGAA GELAGVHVRE 360 GKTSSSEKCI LCIEKSACYV NDSLMQGFAH VCVEHHLEEG QGLAGKALQS NLPFFFPDVK 420 TYDISEYPLV HHARKFGLNA AVAIRLRSTY TGDCDYILEF FLPVNMKGAS EQQLLLNNLS 480 GTMQRICKSL RTVSDVEVGA IPSDAFQKGS VPNFMSLPGE SSQMVLSDSD LNPTDELPLK 540 VSNRRNEGIE ADGVHEQAIR GSRRQTEKKR STAEKNVSLN VLQQYFSGSL KDAAKSIGVC 600 PTTLKRICRQ HGISRWPSRK INKVNRSLRK IQTVLDSVQG VEGGLKFDPT TGGLVAAGSI 660 AQELDAKKSL FFIEKTSSLQ NSDPMSAVKL EEDECCTGGV DPNSGEIRKP NIVSLTNSTK 720 DSKIAIEAGS RLPICDARSG ALSDKACLGS YHAKEGKTSC QSKCSSKFEN SKYYHVSQSS 780 GSLGVCDEMD TAGDGDDELI EHNLPASSSM TDSSNGCGSM LHVSSSSSHS QSFEERKHPK 840 GKMSCGDSGS KIIVKATYRE DTVRFKFDTS AGCSQLYEEV AKRFKLQTGT FQLKYLDDEE 900 EWVMLVSDMD LQECLEILDD IGTQSVKFQV RDMPCAVGSS GSSNCFLAGG S

Sequence ? help Back to Top

Protein Sequence Length: 951 aa Download sequence

MEHPFSSKEK ENEYWSSSRA QVENLASFDG VPRGMLPEDV FNSFSELLTF DAYAGWSNSP  60
AVTDQVSATY GLSSLPSTTY VPMDGSNFAE QNVGALPVTE VGGNFNLPRS SFNYGDKIVF  120
QPVNSEMGMV DSTICRPTRY SLDERMLRAL SFVKESSGGG ILAQVWVPVK HGDQLFLSTS  180
EQPYLLDHML AGYREVSRMY TFAAEGKPGC FPGLPGRVFI SKIPEWTSDV GYYKKNEYVR  240
VEHAYNHQVR GSLALPVFES DPGMPCCAVL EIVTTKEKPN FDTEMEIVCH ALQAVNLRTN  300
PPPRLVHQCL SKNQKDALAE IIDILRAVCH AHRLPLALTW IPCCYGEGAA GELAGVHVRE  360
GKTSSSEKCI LCIEKSACYV NDSLMQGFAH VCVEHHLEEG QGLAGKALQS NLPFFFPDVK  420
TYDISEYPLV HHARKFGLNA AVAIRLRSTY TGDCDYILEF FLPVNMKGAS EQQLLLNNLS  480
GTMQRICKSL RTVSDVEVGA IPSDAFQKGS VPNFMSLPGE SSQMVLSDSD LNPTDELPLK  540
VSNRRNEGIE ADGVHEQAIR GSRRQTEKKR STAEKNVSLN VLQQYFSGSL KDAAKSIGVC  600
PTTLKRICRQ HGISRWPSRK INKVNRSLRK IQTVLDSVQG VEGGLKFDPT TGGLVAAGSI  660
AQELDAKKSL FFIEKTSSLQ NSDPMSAVKL EEDECCTGGV DPNSGEIRKP NIVSLTNSTK  720
DSKIAIEAGS RLPICDARSG ALSDKACLGS YHAKEGKTSC QSKCSSKFEN SKYYHVSQSS  780
GSLGVCDEMD TAGDGDDELI EHNLPASSSM TDSSNGCGSM LHVSSSSSHS QSFEERKHPK  840
GKMSCGDSGS KIIVKATYRE DTVRFKFDTS AGCSQLYEEV AKRFKLQTGT FQLKYLDDEE  900
EWVMLVSDMD LQECLEILDD IGTQSVKFQV RDMPCAVGSS GSSNCFLAGG S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein