PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON34881.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NAC

Protein Properties

Length: 428aa MW: 48570.5 Da PI: 7.3435

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON34881.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.5	1.1e-52	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeel+++yLkkk++ +k+++ evi+evd++k+ePwdL++ ++ + ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + + PON34881.1 8 VPPGFRFHPTDEELLHYYLKKKLSFQKFDM-EVIREVDLNKMEPWDLQErcRIGStPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRN-A 104 69**************************.99**********963433332556*********************************9.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 +++g++ktLvfy+grap+g+ktdW+mhe+rle PON34881.1 105 FKKIGMRKTLVFYRGRAPHGQKTDWIMHEFRLE 137 899*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MASSSGGVPP GFRFHPTDEE LLHYYLKKKL SFQKFDMEVI REVDLNKMEP WDLQERCRIG 60 STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNAFKKIGM RKTLVFYRGR 120 APHGQKTDWI MHEFRLEDQD HQPDHHEDGW VVCRVFKKKN LFKISSSSTA TTTSNNNINE 180 LGSSAANTTN MMINSSSSNT SSEHHHHHGH LINSNYTNNA FNIRSHDHNQ YYLLRHPHHE 240 VPHLNLMQQP NITMSSLELN NKHAATLHSY SPHYNNSSLV QQLISHHKPT TLPPAASYDH 300 YAAARDCESG ASDTALPLRY QPTCETPAQQ PAGLEEAGRS DHQDHEWTML DRIVTSTNNA 360 SHHLGNDHDH NQEQDHHESS KGVRASFEDA AAANNDAPSV SLSVAAAHIN PLSLRGNGEM 420 DFWGGYAK

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MASSSGGVPP GFRFHPTDEE LLHYYLKKKL SFQKFDMEVI REVDLNKMEP WDLQERCRIG  60
STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNAFKKIGM RKTLVFYRGR  120
APHGQKTDWI MHEFRLEDQD HQPDHHEDGW VVCRVFKKKN LFKISSSSTA TTTSNNNINE  180
LGSSAANTTN MMINSSSSNT SSEHHHHHGH LINSNYTNNA FNIRSHDHNQ YYLLRHPHHE  240
VPHLNLMQQP NITMSSLELN NKHAATLHSY SPHYNNSSLV QQLISHHKPT TLPPAASYDH  300
YAAARDCESG ASDTALPLRY QPTCETPAQQ PAGLEEAGRS DHQDHEWTML DRIVTSTNNA  360
SHHLGNDHDH NQEQDHHESS KGVRASFEDA AAANNDAPSV SLSVAAAHIN PLSLRGNGEM  420
DFWGGYAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-104	NAC family protein