PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON34264.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SBP

Protein Properties

Length: 1069aa MW: 118888 Da PI: 8.4367

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON34264.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	105.8	3.1e-33	138	227	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTS............SEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCs............rfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls+ak+yhrrhkvCe hsk++++lv++++qrfCqqCs rfh lsefDe+krsCrrrLa+hn+rrrk+q+ PON34264.1 138 MCQVDNCKEDLSSAKDYHRRHKVCEPHSKSTKALVANQMQRFCQQCSseksqlsrfaayRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 227 6*******************************************88888888888888*************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 1069 aa Download sequence
MEEVGAQVAP PIFIHQRLPA MPKKRDLPYQ IPNFPIDNWN PKVWDWDTVR FLAKPLDSDP 60 LRVASTSTST VDHTKTEEPP GPPPPPPAVT FKKKPSATAA ADEDDATLRL NLGGFDDSAT 120 RPNKRVRSGS PGSTAYPMCQ VDNCKEDLSS AKDYHRRHKV CEPHSKSTKA LVANQMQRFC 180 QQCSSEKSQL SRFAAYRFHP LSEFDEGKRS CRRRLAGHNR RRRKTQPDDV GSRLMLPGDN 240 RDNRTNAHLD IFNLLATVAR AQGGINDDKN MSCSSLPDKE QLLQILSKIN SLPLPVDLAA 300 KLHNLVTLNR KISEQTSSDR HDKLNGRASP STMDLLAALT ATLAPSPSDA LATLSQRSSH 360 SSDSGSGKTK LNCYDQPNAP ASHKRSPRDF PSVGGDRSST SYHSPMEDSD CLVQETRINL 420 PLRLFSWAPE NDSPRKLASS RKYFSSDSSN PIEERSPSAS PPVVQKLFPM QTMAETVKSE 480 KRSASREIDV NVDSGRINGC NMPFDLFRGS NKATDAGSIQ SVPYQAGYTS SGSDHSPSSL 540 NSDVQDRTGR ILFKLFDKDP SHFPGTLRTQ IFNWLSNSPS EMESYIRPGC VILSVYVSMP 600 SASWEQLQEN LLQRLSSLVQ SSASDFWRDG RFLVHTGRQL VSHKDGKFRS CKSWRTWTSP 660 ELISVTPLAV EGGQETSLKL RGRNLNNLGT KIHCTYMGGY TTKEVRGSTY HGTMYEEINL 720 CDFKIHDASR GVLGRCFIEV ENGLKGNSFP VIIADASICK ELRVLESVFD GKERVSDIIA 780 EDQSHDDGQP RSKEEVLHFL NELGWLFQRK RTSSFLDGPN YSLGRFKFLL TFSVERNCSA 840 LMETLLDILV ERNSVGDELS REAVEMLSDI QLLHRAVKRR CRKMVDLLIN YSVFGSNDVS 900 KKYIFPPNHV GPGYITPLHL AACMSASDDL IDALTNDPQE IGLNSWNSLL DASGQTPHAY 960 ALMTNNQSYN KLVSRKLGDR INGQITLTVV NGMSTEFKQG RSSCAKCAVA ATKYYRRVPG 1020 AQGLLQRPYV HSMLAIAAVC VCVCLFLRSV PDIGSVDPFM WENLDYGTI

Sequence ? help Back to Top

Protein Sequence Length: 1069 aa Download sequence

MEEVGAQVAP PIFIHQRLPA MPKKRDLPYQ IPNFPIDNWN PKVWDWDTVR FLAKPLDSDP  60
LRVASTSTST VDHTKTEEPP GPPPPPPAVT FKKKPSATAA ADEDDATLRL NLGGFDDSAT  120
RPNKRVRSGS PGSTAYPMCQ VDNCKEDLSS AKDYHRRHKV CEPHSKSTKA LVANQMQRFC  180
QQCSSEKSQL SRFAAYRFHP LSEFDEGKRS CRRRLAGHNR RRRKTQPDDV GSRLMLPGDN  240
RDNRTNAHLD IFNLLATVAR AQGGINDDKN MSCSSLPDKE QLLQILSKIN SLPLPVDLAA  300
KLHNLVTLNR KISEQTSSDR HDKLNGRASP STMDLLAALT ATLAPSPSDA LATLSQRSSH  360
SSDSGSGKTK LNCYDQPNAP ASHKRSPRDF PSVGGDRSST SYHSPMEDSD CLVQETRINL  420
PLRLFSWAPE NDSPRKLASS RKYFSSDSSN PIEERSPSAS PPVVQKLFPM QTMAETVKSE  480
KRSASREIDV NVDSGRINGC NMPFDLFRGS NKATDAGSIQ SVPYQAGYTS SGSDHSPSSL  540
NSDVQDRTGR ILFKLFDKDP SHFPGTLRTQ IFNWLSNSPS EMESYIRPGC VILSVYVSMP  600
SASWEQLQEN LLQRLSSLVQ SSASDFWRDG RFLVHTGRQL VSHKDGKFRS CKSWRTWTSP  660
ELISVTPLAV EGGQETSLKL RGRNLNNLGT KIHCTYMGGY TTKEVRGSTY HGTMYEEINL  720
CDFKIHDASR GVLGRCFIEV ENGLKGNSFP VIIADASICK ELRVLESVFD GKERVSDIIA  780
EDQSHDDGQP RSKEEVLHFL NELGWLFQRK RTSSFLDGPN YSLGRFKFLL TFSVERNCSA  840
LMETLLDILV ERNSVGDELS REAVEMLSDI QLLHRAVKRR CRKMVDLLIN YSVFGSNDVS  900
KKYIFPPNHV GPGYITPLHL AACMSASDDL IDALTNDPQE IGLNSWNSLL DASGQTPHAY  960
ALMTNNQSYN KLVSRKLGDR INGQITLTVV NGMSTEFKQG RSSCAKCAVA ATKYYRRVPG  1020
AQGLLQRPYV HSMLAIAAVC VCVCLFLRSV PDIGSVDPFM WENLDYGTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	875	880	RAVKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein