PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON34109.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ARR-B | ||||||||
Protein Properties | Length: 567aa MW: 62749.9 Da PI: 6.4467 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 89.2 | 3.7e-28 | 316 | 370 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++ PON34109.1 316 KMKVDWTPELHKKFVHAVEQL-GVDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 370 5689*****************.********************************96 PP | |||||||
2 | Myb_DNA-binding | 43.8 | 6e-14 | 319 | 368 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ PON34109.1 319 VDWTPELHKKFVHAVEQLGVDqaIPSRILELMKvEGLTRHNVASHLQKYR 368 57***********************************************7 PP | |||||||
3 | Response_reg | 32.7 | 3.7e-12 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 +l+ d++ + + +r+ le +y +v ++ + +eal+ + ++ ++l ++ ++ +G ++k +++ + lpii+ + +++ +++ +Ga PON34109.1 20 ILVLDEDTTSAAEIRSKLEAMDY-VVSTFCNETEALTAFSNEPesFHLAIVEVNSN--NGCGTFKFLETTK-GLPIIMTSNIHCLSTMMKCIALGAV 112 7899*******************.***************88887799999998766..6777888887766.8****9999999************* PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +fl Kp ++++l++ PON34109.1 113 EFLPKPLSEDKLRN 126 ***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 567 aa Download sequence |
MVCTANDLQE WKDFPKGLRI LVLDEDTTSA AEIRSKLEAM DYVVSTFCNE TEALTAFSNE 60 PESFHLAIVE VNSNNGCGTF KFLETTKGLP IIMTSNIHCL STMMKCIALG AVEFLPKPLS 120 EDKLRNIWQH VVHKAFNAGG GLLPLPLKPV KESIASLLHL KHENVEQDSK ISVEIENLSE 180 TKENDQEQSA GSDKYPAPST PQLKQGARLL DDGDCPDQTN CSAGKENGEQ DGDCKSVETT 240 YGDSAAEDTI LIGETETPVK TMIKKEDSID GSKSKSHMSS HLHNGNSLIN VIGGADHPGK 300 ASCLTNTSLF KSNRKKMKVD WTPELHKKFV HAVEQLGVDQ AIPSRILELM KVEGLTRHNV 360 ASHLQKYRMH KRHILPKEED RRWPRPRDPV QKNYYPQHPI MAFPTYHSNH ALPVAPVYSM 420 WGQPGGHPAS VQMWGPPAYP PWQATESWQW KPYSGMHADA WGCPVMPPPH GPYASYPQNV 480 SGFHNVGVVD NVCSMPQNSF DFHPAEEVID KVVKEAINKP WLPLPLGLKP PSTDSVLSEL 540 SRQGISSIPP HINGSDSFCH GTGSHHD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-130 | ARR-B family protein |