PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON33438.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 552aa MW: 59576.5 Da PI: 7.1439

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON33438.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.8	9.2e-09	362	409	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PON33438.1 362 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 409 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MESFKYCMEI QSNELNSSDQ LRDCFFKPNW ESSMDQSDPF ESALSSIVSS PVAATSNAGA 60 GDGVMIRELI GRLGNICNSG EISPQSYMCS NSNSTNTSCY GTPLNSPPKL NSSMADPQIR 120 ASFQIPGAHL PTPPSLAPFS GDPGFAERAA KFSCFGSRNF GGLSGQFGVN ETELPFRSSM 180 TRTESIEKAR QALSVGGSQM VVGHESNKVS LTQNGNSGSD KRTNRVSRSS TPEKGGEFGE 240 SREGSSVSDQ IPSGEMSGKL EVEANARKRK AVPRGKAKET PSPSVKDAKA ALEIDESNAK 300 RTKKDGATGN EKDGATKTKA ETEGGKGSGE GNQKQTKESS KPPEPPKDYI HVRARRGQAT 360 DSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA 420 TVNPRMDFNM EALLSKEIFQ SRGSLPHALY PLDSSSMPAA FQFGYTPQQV PQLHNGISTA 480 SETQFPVNPL NGSMHRAPSI QLPAIEGFAE PPPQGSTFFE DDLQSVVQMG FGQIQQQGIQ 540 GSMTAAQMKV EL

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MESFKYCMEI QSNELNSSDQ LRDCFFKPNW ESSMDQSDPF ESALSSIVSS PVAATSNAGA  60
GDGVMIRELI GRLGNICNSG EISPQSYMCS NSNSTNTSCY GTPLNSPPKL NSSMADPQIR  120
ASFQIPGAHL PTPPSLAPFS GDPGFAERAA KFSCFGSRNF GGLSGQFGVN ETELPFRSSM  180
TRTESIEKAR QALSVGGSQM VVGHESNKVS LTQNGNSGSD KRTNRVSRSS TPEKGGEFGE  240
SREGSSVSDQ IPSGEMSGKL EVEANARKRK AVPRGKAKET PSPSVKDAKA ALEIDESNAK  300
RTKKDGATGN EKDGATKTKA ETEGGKGSGE GNQKQTKESS KPPEPPKDYI HVRARRGQAT  360
DSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA  420
TVNPRMDFNM EALLSKEIFQ SRGSLPHALY PLDSSSMPAA FQFGYTPQQV PQLHNGISTA  480
SETQFPVNPL NGSMHRAPSI QLPAIEGFAE PPPQGSTFFE DDLQSVVQMG FGQIQQQGIQ  540
GSMTAAQMKV EL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48560.1	1e-75	bHLH family protein