PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON33318.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | GRAS | ||||||||
Protein Properties | Length: 718aa MW: 77026.3 Da PI: 6.3787 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 246.8 | 8.9e-76 | 498 | 712 | 2 | 227 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 +lLl+cAeavs++++ +a+++L ++sel++p g++ qR+aayf eA++arl++s+ ++y+a+p+ ++++s++ ++a+++f+ +sP++kfsh+taNq PON33318.1 498 LTLLLQCAEAVSADNFDEANKILLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAAVPAAGVPQSHSQRMASAFQVFNGISPFVKFSHFTANQ 596 579************************************************************************************************ PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199 aI ea+e+eervHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g s ++le+tg+rL++fA++l++pfef + va+++ +l++e+L+v+++ PON33318.1 597 AIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT----SMDSLEATGKRLSDFADKLRLPFEFFP-VADKVGNLDPERLNVSKR 690 *************************************************....***************************.7***************** PP GRAS 200 EalaVnlvlqlhrlldesvsleserdev 227 Ea+aV++ h+l+d ++s ++ + PON33318.1 691 EAVAVHWLQ--HSLYDVTGSDTN----T 712 *******99..888887877776....4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 718 aa Download sequence |
MAASALLSSD NAGGDTTSPD VSGNAAATNN NNSDNHTSAT AHVAGAGGSN SSGSSEGLSI 60 TVNRRRFQPQ QQQQQQQRLA VLSVEGGKMV RKRMASEMEV QTATASAAAD YLRLSRRGVP 120 MTIGFSFPAT GDSNSIDSNM INYNVIPAPN PNTSSSAPTL VRPSSVSTTL INPNYSTLLP 180 SSTSLTNMTS GGVSGVLSSS NIATSSQIDP LHYHHPPPHH HNYNNQIRSL PHQTHQQYQS 240 PAVCGFSGLP LFPPETTSRE VNTNTNNNIN INNTSSNTNT NTNNNNNNNN NPSASPPAAG 300 GSGCRVISPT TTSSATTSSM DDNNQNHHNH SASATAWIDG IIKDLIHSST NVSIPQLIHN 360 VREIIYPCNP NLATLLEYRL RTCIASDPPP PPNVAIFSPQ PESSPVAAAA AMNNNNNNSD 420 LYLHWGGAVL PPPPLLPSTT TAAVVDVQSH HAPQQDQHPE SSSPAEEPVQ VPSPAVLLRE 480 KKEELRQQKR DEEGLHLLTL LLQCAEAVSA DNFDEANKIL LEISELSTPF GTSAQRVAAY 540 FSEAMSARLV SSCLGIYAAV PAAGVPQSHS QRMASAFQVF NGISPFVKFS HFTANQAIQE 600 AFEREERVHI IDLDIMQGLQ WPGLFHILAS RPGGPPYVRL TGLGTSMDSL EATGKRLSDF 660 ADKLRLPFEF FPVADKVGNL DPERLNVSKR EAVAVHWLQH SLYDVTGSDT NTLWLLQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 1e-138 | GRAS family protein |