PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32526.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 575aa MW: 62311.5 Da PI: 6.7024

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.5	0.00028	467	499	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++++ + +K + a++L +A++YIk Lq PON32526.1 467 DRITALQQIVSPF-----GKTDTASVLYEAIQYIKFLQ 499 6788888888887.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MAEECAESSV ATSSSSAVVP PCNNWWDLHA AGSSALSSWC HNNNNNGSGN IPWHNIHATA 60 APNPNSNSDE DVSISTSFTN ASNHSGLTVE SSRRLVEPAA SSSDDLIAEQ QAASDNHIWS 120 HVLLNVGNNG DLHNHQDVGE NFLDMLSSSK SNISTSGMYE PACDYLKKLD SSNSNWDNNQ 180 FSNNFDDQKP IIHNSATFNE SMIENERLTN KLSSLISTWS IAPPEPLELN NINTSSTTNR 240 HYFNPQTCNI SLSSSMDHHL KQTFGDSEAG LFPPCNYVPS LKIENRHGGG EIEESCPATA 300 GALLRRSFNG ASNIGAIGYQ VGLNSSFMAA DHNGKYHYGM PAPAPGPGTG PVDSYSSCNG 360 NSSTTAKNFA DVISFGGRLG KPLIDIHASN NKPCINKSLG LSDSKKQGLQ SSTPTRGSGR 420 GQANTSSEGK KKRSEDTTSE TSLKKPKQEN STASSAKMQA PKVKLGDRIT ALQQIVSPFG 480 KTDTASVLYE AIQYIKFLQE QVQLLSNPYM KTNSHKDPWG SLDRNKDHHM KGDHAKLDLR 540 SRGLCLVPLS CTPQVYRENT GSDYWTPTYR GCLYR

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MAEECAESSV ATSSSSAVVP PCNNWWDLHA AGSSALSSWC HNNNNNGSGN IPWHNIHATA  60
APNPNSNSDE DVSISTSFTN ASNHSGLTVE SSRRLVEPAA SSSDDLIAEQ QAASDNHIWS  120
HVLLNVGNNG DLHNHQDVGE NFLDMLSSSK SNISTSGMYE PACDYLKKLD SSNSNWDNNQ  180
FSNNFDDQKP IIHNSATFNE SMIENERLTN KLSSLISTWS IAPPEPLELN NINTSSTTNR  240
HYFNPQTCNI SLSSSMDHHL KQTFGDSEAG LFPPCNYVPS LKIENRHGGG EIEESCPATA  300
GALLRRSFNG ASNIGAIGYQ VGLNSSFMAA DHNGKYHYGM PAPAPGPGTG PVDSYSSCNG  360
NSSTTAKNFA DVISFGGRLG KPLIDIHASN NKPCINKSLG LSDSKKQGLQ SSTPTRGSGR  420
GQANTSSEGK KKRSEDTTSE TSLKKPKQEN STASSAKMQA PKVKLGDRIT ALQQIVSPFG  480
KTDTASVLYE AIQYIKFLQE QVQLLSNPYM KTNSHKDPWG SLDRNKDHHM KGDHAKLDLR  540
SRGLCLVPLS CTPQVYRENT GSDYWTPTYR GCLYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	8e-60	bHLH family protein