PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32399.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 391aa MW: 43136.1 Da PI: 6.7017

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32399.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.4	5.1e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q G+g +W + ++++g++R++k+c++rw++yl PON32399.1 14 KGPWSPEEDAKLKAYIEQNGTGgNWIALPQKIGLRRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	36.5	1.1e-11	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ PON32399.1 69 GGFSEEEDNIICSLYLSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE QNGTGGNWIA LPQKIGLRRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYLSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEQAAAAA ANQAAARRAN NNNNVVKPEI IKREASSTTT AFDHNILLPG GLMMSHQTVP 180 YWPELPAVTA MPVVNNNINN NHYYDVSDQL KDQEAAASIK NFLIKLGGRF SETESGTTST 240 TTTTSTPDFQ YPLDQSYQTA ASFDHQWPIM GQYEVEASGV GPTSMDHGLE KLQAELSQLI 300 YSNPVQEILL DGSDHDGFYG SMEMVKAAGS SITGSGTSTT TNSVDSGISS LLNINYPSMV 360 SDYGNYQPHD HHHHHQDSAF GYVFESNLIN S

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE QNGTGGNWIA LPQKIGLRRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYLSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEQAAAAA ANQAAARRAN NNNNVVKPEI IKREASSTTT AFDHNILLPG GLMMSHQTVP  180
YWPELPAVTA MPVVNNNINN NHYYDVSDQL KDQEAAASIK NFLIKLGGRF SETESGTTST  240
TTTTSTPDFQ YPLDQSYQTA ASFDHQWPIM GQYEVEASGV GPTSMDHGLE KLQAELSQLI  300
YSNPVQEILL DGSDHDGFYG SMEMVKAAGS SITGSGTSTT TNSVDSGISS LLNINYPSMV  360
SDYGNYQPHD HHHHHQDSAF GYVFESNLIN S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	8e-81	MYB family protein